RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 CASP4P49662 377 aa14.59□□□□□ -0.07
RPAIN-205ENST00000536255 PMS1P54277 932 aaKnown RBP14.59□□□□□ -0.07
RPAIN-205ENST00000536255 WNT7BP56706 349 aa14.59□□□□□ -0.07
RPAIN-205ENST00000536255 RBP5P82980 135 aa14.59□□□□□ -0.07
RPAIN-205ENST00000536255 SKOR2Q2VWA4 1001 aaPredicted RBP14.59□□□□□ -0.07
RPAIN-205ENST00000536255 CT47A1Q5JQC4 288 aaPredicted RBP14.59□□□□□ -0.07
RPAIN-205ENST00000536255 SASS6Q6UVJ0 657 aa14.59□□□□□ -0.07
RPAIN-205ENST00000536255 C15orf39Q6ZRI6 1047 aa14.59□□□□□ -0.07
RPAIN-205ENST00000536255 SPATA31D4Q6ZUB0 917 aa14.59□□□□□ -0.07
RPAIN-205ENST00000536255 ZC3H3Q8IXZ2 948 aaKnown RBP14.59□□□□□ -0.07
RPAIN-205ENST00000536255 CSGALNACT2Q8N6G5 542 aa14.59□□□□□ -0.07
RPAIN-205ENST00000536255 CMASQ8NFW8 434 aaPredicted RBP14.59□□□□□ -0.07
RPAIN-205ENST00000536255 PARD3BQ8TEW8 1205 aa14.59□□□□□ -0.07
RPAIN-205ENST00000536255 CEP63Q96MT8 703 aa14.59□□□□□ -0.07
RPAIN-205ENST00000536255 RWDD2AQ9UIY3 292 aa14.59□□□□□ -0.07
RPAIN-205ENST00000536255 BACE2Q9Y5Z0 518 aa14.59□□□□□ -0.07
RPAIN-205ENST00000536255 VWA8A3KMH1 1905 aa14.58□□□□□ -0.07
RPAIN-205ENST00000536255 LOC730098B7Z3J9 87 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 PPEF2O14830 753 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 IKBKBO14920 756 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 ADAM12O43184 909 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 ITGB3P05106 788 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 KRT19P08727 400 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 OR1D2P34982 312 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 AARSP49588 968 aaKnown RBP eCLIP14.58□□□□□ -0.08
RPAIN-205ENST00000536255 TAF6P49848 677 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 VAMP7P51809 220 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 CLDN10P78369 228 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 MYO1EQ12965 1108 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 SV2CQ496J9 727 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 ATAT1Q5SQI0 421 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 VARS2Q5ST30 1063 aaKnown RBP14.58□□□□□ -0.08
RPAIN-205ENST00000536255 LMBRD2Q68DH5 695 aaPredicted RBP14.58□□□□□ -0.08
RPAIN-205ENST00000536255 TTI2Q6NXR4 508 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 CAVIN1Q6NZI2 390 aaKnown RBP14.58□□□□□ -0.08
RPAIN-205ENST00000536255 GPR149Q86SP6 731 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 LRRC52Q8N7C0 313 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 C1orf127Q8N9H9 656 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 KREMEN2Q8NCW0 462 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 APPL2Q8NEU8 664 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 FEZF2Q8TBJ5 459 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 POMKQ9H5K3 350 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 METTL14Q9HCE5 456 aaKnown RBP14.58□□□□□ -0.08
RPAIN-205ENST00000536255 FBXW11Q9UKB1 542 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 PCDHB8Q9UN66 801 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 CDY1Q9Y6F8 540 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 PLXNA3P51805 1871 aa14.58□□□□□ -0.08
RPAIN-205ENST00000536255 ANK1P16157 1881 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 CCDC195A0A1B0GUA6 201 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 LRRIQ3A6PVS8 624 aaPredicted RBP14.57□□□□□ -0.08
RPAIN-205ENST00000536255 H7C4K7 107 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 M0QZQ0 153 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 STX10O60499 249 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 RFPL2O75678 378 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 LETM1O95202 739 aaPredicted RBP14.57□□□□□ -0.08
RPAIN-205ENST00000536255 GNA14O95837 355 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 ERCC5P28715 1186 aaPredicted RBP14.57□□□□□ -0.08
RPAIN-205ENST00000536255 POLR2BP30876 1174 aaKnown RBP14.57□□□□□ -0.08
RPAIN-205ENST00000536255 STX17P56962 302 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 LILRA4P59901 499 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 BFSP1Q12934 665 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 TRPC3Q13507 836 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 RAB33AQ14088 237 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 MRPL58Q14197 206 aaKnown RBP14.57□□□□□ -0.08
RPAIN-205ENST00000536255 DPCR1Q3MIW9 517 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 SLC8B1Q6J4K2 584 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 RSPO2Q6UXX9 243 aaPredicted RBP14.57□□□□□ -0.08
RPAIN-205ENST00000536255 DSTYKQ6XUX3 929 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 TRAPPC11Q7Z392 1133 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 FILIP1Q7Z7B0 1213 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 OR5B17Q8NGF7 314 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 KHSRPQ92945 711 aaKnown RBP eCLIP14.57□□□□□ -0.08
RPAIN-205ENST00000536255 EEF2KMTQ96G04 330 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 RPGRIP1Q96KN7 1286 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 ANO10Q9NW15 660 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 ZDHHC7Q9NXF8 308 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 TMEM63CQ9P1W3 806 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 AGAP1Q9UPQ3 857 aa14.57□□□□□ -0.08
RPAIN-205ENST00000536255 TBC1D4O60343 1298 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 PHACTR2O75167 634 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 PAPLNO95428 1278 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 ODC1P11926 461 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 BIRC3Q13489 604 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 STX1AQ16623 288 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 TPD52L1Q16890 204 aaPredicted RBP14.56□□□□□ -0.08
RPAIN-205ENST00000536255 CCDC40Q4G0X9 1142 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 CTXN3Q4LDR2 81 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 LIN9Q5TKA1 542 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 ZNF280DQ6N043 979 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 CYP26C1Q6V0L0 522 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 FRMD5Q7Z6J6 570 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 DUSP9Q99956 384 aaKnown RBP14.56□□□□□ -0.08
RPAIN-205ENST00000536255 RHOBTB2Q9BYZ6 727 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 ARMCX3Q9UH62 379 aaPredicted RBP14.56□□□□□ -0.08
RPAIN-205ENST00000536255 DSEQ9UL01 958 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 PTPRJQ12913 1337 aa14.56□□□□□ -0.08
RPAIN-205ENST00000536255 KPNA7A9QM74 516 aa14.55□□□□□ -0.08
RPAIN-205ENST00000536255 SPTLC1O15269 473 aa14.55□□□□□ -0.08
RPAIN-205ENST00000536255 ZMYND10O75800 440 aa14.55□□□□□ -0.08
RPAIN-205ENST00000536255 C8AP07357 584 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms