RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 E2F7Q96AV8 911 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 HHIPQ96QV1 700 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 ADPGKQ9BRR6 497 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 LARP6Q9BRS8 491 aaKnown RBP13.5□□□□□ -0.25
SVIP-205ENST00000533774 KIFC3Q9BVG8 833 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 GPR88Q9GZN0 384 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 POLD4Q9HCU8 107 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 YIPF1Q9Y548 306 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 FLNBO75369 2602 aaKnown RBP13.49□□□□□ -0.25
SVIP-205ENST00000533774 TSC2P49815 1807 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 OTOL1A6NHN0 477 aaPredicted RBP13.49□□□□□ -0.25
SVIP-205ENST00000533774 PATE3B3GLJ2 98 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 H7C4K7 107 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 WNT7AO00755 349 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 SYN3O14994 580 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 HYAL3O43820 417 aaPredicted RBP13.49□□□□□ -0.25
SVIP-205ENST00000533774 MARCH6O60337 910 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 CAVIN2O95810 425 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 SPATA31C1P0DKV0 1188 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 CEACAM1P13688 526 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 CREB5Q02930 508 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 MAPK6Q16659 721 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 TMEM132AQ24JP5 1023 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 ARHGAP29Q52LW3 1261 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 SOWAHCQ53LP3 525 aaPredicted RBP13.49□□□□□ -0.25
SVIP-205ENST00000533774 TMEM196Q5HYL7 178 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 NAIF1Q69YI7 327 aaPredicted RBP13.49□□□□□ -0.25
SVIP-205ENST00000533774 TRIM22Q8IYM9 498 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 LEMD2Q8NC56 503 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 BEST2Q8NFU1 509 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 FAM200AQ8TCP9 573 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 C18orf25Q96B23 403 aaPredicted RBP13.49□□□□□ -0.25
SVIP-205ENST00000533774 TMEM209Q96SK2 561 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 FBRSL1Q9HCM7 1045 aaKnown RBP13.49□□□□□ -0.25
SVIP-205ENST00000533774 KLK13Q9UKR3 277 aa13.49□□□□□ -0.25
SVIP-205ENST00000533774 EGFP01133 1207 aa13.48□□□□□ -0.25
SVIP-205ENST00000533774 CAPNS1P04632 268 aa13.48□□□□□ -0.25
SVIP-205ENST00000533774 OR4Q2P0C623 313 aa13.48□□□□□ -0.25
SVIP-205ENST00000533774 CSRP1P21291 193 aaKnown RBP13.48□□□□□ -0.25
SVIP-205ENST00000533774 DCAF4L1Q3SXM0 396 aa13.48□□□□□ -0.25
SVIP-205ENST00000533774 SLFN12Q8IYM2 578 aa13.48□□□□□ -0.25
SVIP-205ENST00000533774 DEFB124Q8NES8 71 aa13.48□□□□□ -0.25
SVIP-205ENST00000533774 SUSD3Q96L08 255 aa13.48□□□□□ -0.25
SVIP-205ENST00000533774 HPS4Q9NQG7 708 aa13.48□□□□□ -0.25
SVIP-205ENST00000533774 SLC8A2Q9UPR5 921 aa13.48□□□□□ -0.25
SVIP-205ENST00000533774 INVSQ9Y283 1065 aa13.48□□□□□ -0.25
SVIP-205ENST00000533774 HELZ2Q9BYK8 2649 aaKnown RBP13.47□□□□□ -0.25
SVIP-205ENST00000533774 MYH11P35749 1972 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 RNF40O75150 1001 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 SOAT2O75908 522 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 ATP2B1P20020 1258 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 OSTNP61366 133 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 ITPRIPL2Q3MIP1 535 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 ATF7IP2Q5U623 682 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 DAB2IPQ5VWQ8 1189 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 ZNF280DQ6N043 979 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 TTC9BQ8N6N2 239 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 DDX12PQ92771 950 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 CCDC43Q96MW1 224 aaKnown RBP13.47□□□□□ -0.25
SVIP-205ENST00000533774 TBC1D32Q96NH3 1257 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 PGLYRP2Q96PD5 576 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 SMG9Q9H0W8 520 aaKnown RBP13.47□□□□□ -0.25
SVIP-205ENST00000533774 C2orf40Q9H1Z8 148 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 PCDHA12Q9UN75 941 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 MYO18AQ92614 2054 aaKnown RBP13.47□□□□□ -0.25
SVIP-205ENST00000533774 ANAPC1Q9H1A4 1944 aa13.47□□□□□ -0.25
SVIP-205ENST00000533774 ASXL3Q9C0F0 2248 aa13.46□□□□□ -0.25
SVIP-205ENST00000533774 BAG4O95429 457 aaKnown RBP13.46□□□□□ -0.25
SVIP-205ENST00000533774 XRCC6P12956 609 aaKnown RBP eCLIP13.46□□□□□ -0.25
SVIP-205ENST00000533774 CPB1P15086 417 aa13.46□□□□□ -0.25
SVIP-205ENST00000533774 U2AF2P26368 475 aaKnown RBP eCLIP13.46□□□□□ -0.25
SVIP-205ENST00000533774 HSPA4P34932 840 aa13.46□□□□□ -0.25
SVIP-205ENST00000533774 DUSP4Q13115 394 aa13.46□□□□□ -0.25
SVIP-205ENST00000533774 GPR158Q5T848 1215 aa13.46□□□□□ -0.25
SVIP-205ENST00000533774 FAM177A1Q8N128 213 aaPredicted RBP13.46□□□□□ -0.25
SVIP-205ENST00000533774 MCPH1Q8NEM0 835 aa13.46□□□□□ -0.25
SVIP-205ENST00000533774 BPIFB1Q8TDL5 484 aa13.46□□□□□ -0.25
SVIP-205ENST00000533774 EZH1Q92800 747 aaPredicted RBP13.46□□□□□ -0.25
SVIP-205ENST00000533774 POLR3CQ9BUI4 534 aaPredicted RBP13.46□□□□□ -0.25
SVIP-205ENST00000533774 CDT1Q9H211 546 aa13.46□□□□□ -0.25
SVIP-205ENST00000533774 TTC12Q9H892 705 aaPredicted RBP13.46□□□□□ -0.25
SVIP-205ENST00000533774 TMEM9BQ9NQ34 198 aa13.46□□□□□ -0.25
SVIP-205ENST00000533774 OBP2AQ9NY56 170 aa13.46□□□□□ -0.25
SVIP-205ENST00000533774 MAFFQ9ULX9 164 aa13.46□□□□□ -0.25
SVIP-205ENST00000533774 SLC27A5Q9Y2P5 690 aa13.46□□□□□ -0.25
SVIP-205ENST00000533774 NEUROG3Q9Y4Z2 214 aa13.46□□□□□ -0.25
SVIP-205ENST00000533774 TIMM13Q9Y5L4 95 aaPredicted RBP13.46□□□□□ -0.25
SVIP-205ENST00000533774 PLXND1Q9Y4D7 1925 aa13.46□□□□□ -0.25
SVIP-205ENST00000533774 ACACAQ13085 2346 aa13.46□□□□□ -0.26
SVIP-205ENST00000533774 MYOFQ9NZM1 2061 aa13.46□□□□□ -0.26
SVIP-205ENST00000533774 SCN1AP35498 2009 aa13.46□□□□□ -0.26
SVIP-205ENST00000533774 PTPRBP23467 1997 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 TCHHQ07283 1943 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 CELSR3Q9NYQ7 3312 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 DPYSL4O14531 572 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 TRDMT1O14717 391 aaKnown RBP13.45□□□□□ -0.26
SVIP-205ENST00000533774 MED24O75448 989 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 GRM5P41594 1212 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 NAMPTP43490 491 aa13.45□□□□□ -0.26
SVIP-205ENST00000533774 IRX4P78413 519 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms