RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 LIMS2Q7Z4I7 341 aa11.67□□□□□ -0.54
GPATCH4-216ENST00000531900 PALB2Q86YC2 1186 aa11.67□□□□□ -0.54
GPATCH4-216ENST00000531900 TCEAL8Q8IYN2 117 aa11.67□□□□□ -0.54
GPATCH4-216ENST00000531900 TMEM130Q8N3G9 435 aa11.67□□□□□ -0.54
GPATCH4-216ENST00000531900 PBXIP1Q96AQ6 731 aa11.67□□□□□ -0.54
GPATCH4-216ENST00000531900 ZNF707Q96C28 371 aaPredicted RBP11.67□□□□□ -0.54
GPATCH4-216ENST00000531900 PRKD2Q9BZL6 878 aa11.67□□□□□ -0.54
GPATCH4-216ENST00000531900 GDAP2Q9NXN4 497 aa11.67□□□□□ -0.54
GPATCH4-216ENST00000531900 SIX4Q9UIU6 781 aa11.67□□□□□ -0.54
GPATCH4-216ENST00000531900 DSEQ9UL01 958 aa11.67□□□□□ -0.54
GPATCH4-216ENST00000531900 PCDHA5Q9Y5H7 936 aa11.67□□□□□ -0.54
GPATCH4-216ENST00000531900 PTPRJQ12913 1337 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 CCDC195A0A1B0GUA6 201 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 WDR27A2RRH5 827 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 OR6C75A6NL08 312 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 KPNA7A9QM74 516 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 CALUO43852 315 aaPredicted RBP11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 EXOC3O60645 756 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 KINO60870 393 aaKnown RBP11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 STAU1O95793 577 aaKnown RBP11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 NR3C1P04150 777 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 FAM163BP0C2L3 166 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 ODC1P11926 461 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 SP100P23497 879 aaPredicted RBP11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 AP3M2P53677 418 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 RBP5P82980 135 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 TFAMQ00059 246 aaKnown RBP11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 ROR1Q01973 937 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 YWHAHQ04917 246 aaPredicted RBP11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 SIGLEC14Q08ET2 396 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 GPR17Q13304 367 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 PTPN21Q16825 1174 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 EDRF1Q3B7T1 1238 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 SV2CQ496J9 727 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 FOXR2Q6PJQ5 311 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 TMC5Q6UXY8 1006 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 DSTYKQ6XUX3 929 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 DPH6Q7L8W6 267 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 SUGP1Q8IWZ8 645 aaKnown RBP11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 PLCD3Q8N3E9 789 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 C12orf76Q8N812 135 aaPredicted RBP11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 OR5B17Q8NGF7 314 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 PARD3BQ8TEW8 1205 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 ANKRD36BP1Q96IX9 119 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 ZNF560Q96MR9 790 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 POMKQ9H5K3 350 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 HSFX1Q9UBD0 423 aa11.66□□□□□ -0.54
GPATCH4-216ENST00000531900 IKBKBO14920 756 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 RFPL2O75678 378 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 ITGB3P05106 788 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 TMEM191BP0C7N4 346 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 RPL13P26373 211 aaKnown RBP11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 POLR2BP30876 1174 aaKnown RBP11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 CYP2J2P51589 502 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 CTXN3Q4LDR2 81 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 OVOS1Q6IE37 1185 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 CENPPQ6IPU0 288 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 CCDC149Q6ZUS6 474 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 TRAPPC11Q7Z392 1133 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 USP37Q86T82 979 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 ZC3H3Q8IXZ2 948 aaKnown RBP11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 CSGALNACT2Q8N6G5 542 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 TDRD5Q8NAT2 981 aaKnown RBP11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 RDH13Q8NBN7 331 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 TMC2Q8TDI7 906 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 ZNF516Q92618 1163 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 SMARCE1Q969G3 411 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 ACSF2Q96CM8 615 aaPredicted RBP11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 IPO9Q96P70 1041 aaKnown RBP11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 FNBP1Q96RU3 617 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 CGRRF1Q99675 332 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 MTMR12Q9C0I1 747 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 VRTNQ9H8Y1 702 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 WDR6Q9NNW5 1121 aaKnown RBP11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 AVENQ9NQS1 362 aaPredicted RBP11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 AFF4Q9UHB7 1163 aaKnown RBP11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 AGAP1Q9UPQ3 857 aa11.65□□□□□ -0.54
GPATCH4-216ENST00000531900 TECTAO75443 2155 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 C2CD4DB7Z1M9 353 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 CYB561D2O14569 222 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 TNNC2P02585 160 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 C8AP07357 584 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 WEE2P0C1S8 567 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 SPATA31D3P0C874 917 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 PPP1R2P41236 205 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 PRCPP42785 496 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 SMARCB1Q12824 385 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 MTMR3Q13615 1198 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 LIN9Q5TKA1 542 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 SCARA3Q6AZY7 606 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 SPATA31D4Q6ZUB0 917 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 GLYCTKQ8IVS8 523 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 UBALD2Q8IYN6 164 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 ZDHHC14Q8IZN3 488 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 ADSSL1Q8N142 457 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 TMEM86AQ8N2M4 240 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 TOP6BLQ8N6T0 577 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 PLEKHO2Q8TD55 490 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 PRRX2Q99811 253 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 RTP3Q9BQQ7 232 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms