RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 TRIM49CP0CI26 452 aa12.79□□□□□ -0.36
LTBP3-219ENST00000530990 HOXB8P17481 243 aaPredicted RBP12.79□□□□□ -0.36
LTBP3-219ENST00000530990 PAX3P23760 479 aa12.79□□□□□ -0.36
LTBP3-219ENST00000530990 CCNE1P24864 410 aa12.79□□□□□ -0.36
LTBP3-219ENST00000530990 PPP1R2P41236 205 aa12.79□□□□□ -0.36
LTBP3-219ENST00000530990 ARPP19P56211 112 aa12.79□□□□□ -0.36
LTBP3-219ENST00000530990 CLDN10P78369 228 aa12.79□□□□□ -0.36
LTBP3-219ENST00000530990 LRRC63Q05C16 580 aa12.79□□□□□ -0.36
LTBP3-219ENST00000530990 RAB33AQ14088 237 aa12.79□□□□□ -0.36
LTBP3-219ENST00000530990 PUS10Q3MIT2 529 aaKnown RBP12.79□□□□□ -0.36
LTBP3-219ENST00000530990 TDRD10Q5VZ19 366 aaKnown RBP12.79□□□□□ -0.36
LTBP3-219ENST00000530990 OVOS1Q6IE37 1185 aa12.79□□□□□ -0.36
LTBP3-219ENST00000530990 USP37Q86T82 979 aa12.79□□□□□ -0.36
LTBP3-219ENST00000530990 ZC3H3Q8IXZ2 948 aaKnown RBP12.79□□□□□ -0.36
LTBP3-219ENST00000530990 TRIML1Q8N9V2 468 aa12.79□□□□□ -0.36
LTBP3-219ENST00000530990 KREMEN2Q8NCW0 462 aa12.79□□□□□ -0.36
LTBP3-219ENST00000530990 TMC2Q8TDI7 906 aa12.79□□□□□ -0.36
LTBP3-219ENST00000530990 DHTKD1Q96HY7 919 aaPredicted RBP12.79□□□□□ -0.36
LTBP3-219ENST00000530990 DOCK6Q96HP0 2047 aa12.79□□□□□ -0.36
LTBP3-219ENST00000530990 MUC3AQ02505 3323 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 ARHGEF37A1IGU5 675 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 CETN3O15182 167 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 RFPL2O75678 378 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 OAZ2O95190 189 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 C1RP00736 705 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 OR4Q2P0C623 313 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 PSMC2P35998 433 aaKnown RBP12.78□□□□□ -0.36
LTBP3-219ENST00000530990 VAMP7P51809 220 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 BIRC3Q13489 604 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 SMAD2Q15796 467 aaKnown RBP12.78□□□□□ -0.36
LTBP3-219ENST00000530990 C1orf220Q5T0J3 134 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 WSCD1Q658N2 575 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 TTI2Q6NXR4 508 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 TMC5Q6UXY8 1006 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 INTS8Q75QN2 995 aaKnown RBP12.78□□□□□ -0.36
LTBP3-219ENST00000530990 OR10T2Q8NGX3 314 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 ADAMTS19Q8TE59 1207 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 NELFBQ8WX92 580 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 SUSD6Q92537 303 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 HPDLQ96IR7 371 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 NECAB3Q96P71 396 aaPredicted RBP12.78□□□□□ -0.36
LTBP3-219ENST00000530990 TMEM209Q96SK2 561 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 MKNK1Q9BUB5 465 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 PLEKHA4Q9H4M7 779 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 L1RE1Q9UN81 338 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 R3HCC1Q9Y3T6 440 aaKnown RBP12.78□□□□□ -0.36
LTBP3-219ENST00000530990 SNX9Q9Y5X1 595 aa12.78□□□□□ -0.36
LTBP3-219ENST00000530990 TNFRSF10AO00220 468 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 SLC16A3O15427 465 aaKnown RBP12.77□□□□□ -0.37
LTBP3-219ENST00000530990 CST3P01034 146 aaPredicted RBP12.77□□□□□ -0.37
LTBP3-219ENST00000530990 C4BPAP04003 597 aaKnown RBP12.77□□□□□ -0.37
LTBP3-219ENST00000530990 EPB41P11171 864 aaKnown RBP12.77□□□□□ -0.37
LTBP3-219ENST00000530990 KRT13P13646 458 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 CPB1P15086 417 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 AP3M2P53677 418 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 STX17P56962 302 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 FKBP3Q00688 224 aaKnown RBP12.77□□□□□ -0.37
LTBP3-219ENST00000530990 ITIH3Q06033 890 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 MYO1EQ12965 1108 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 PAK1Q13153 545 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 CBX2Q14781 532 aaPredicted RBP12.77□□□□□ -0.37
LTBP3-219ENST00000530990 LIN9Q5TKA1 542 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 ELMSAN1Q6PJG2 1045 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 PDCL2Q8N4E4 241 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 SLC7A14Q8TBB6 771 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 HDAC7Q8WUI4 952 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 DUSP9Q99956 384 aaKnown RBP12.77□□□□□ -0.37
LTBP3-219ENST00000530990 RTP3Q9BQQ7 232 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 ADAM7Q9H2U9 754 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 GDAP2Q9NXN4 497 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 DPP7Q9UHL4 492 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 DSEQ9UL01 958 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 FAM50BQ9Y247 325 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 PTPRDP23468 1912 aa12.77□□□□□ -0.37
LTBP3-219ENST00000530990 CCDC195A0A1B0GUA6 201 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 BICDL2A1A5D9 508 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 OR6C75A6NL08 312 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 PHACTR2O75167 634 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 ZMYND10O75800 440 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 ABLIM3O94929 683 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 VNN1O95497 513 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 C8AP07357 584 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 MYL6P60660 151 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 PPP3CAQ08209 521 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 TRPC3Q13507 836 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 SOWAHAQ2M3V2 549 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 ZACNQ401N2 412 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 CES5AQ6NT32 575 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 RNF19BQ6ZMZ0 732 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 SV2AQ7L0J3 742 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 GPR149Q86SP6 731 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 METTL23Q86XA0 190 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 ADGRF2Q8IZF7 708 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 TOP6BLQ8N6T0 577 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 CMASQ8NFW8 434 aaPredicted RBP12.76□□□□□ -0.37
LTBP3-219ENST00000530990 ZNF461Q8TAF7 563 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 ELMO3Q96BJ8 720 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 ZNF707Q96C28 371 aaPredicted RBP12.76□□□□□ -0.37
LTBP3-219ENST00000530990 PGLYRP2Q96PD5 576 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 OXCT2Q9BYC2 517 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms