RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 E2F7Q96AV8 911 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 MSANTD3Q96H12 275 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 ACAP3Q96P50 834 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 TCHPQ9BT92 498 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 TARS2Q9BW92 718 aaKnown RBP12.36□□□□□ -0.43
SF3B2-208ENST00000529994 LRRC3Q9BY71 257 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 GPR88Q9GZN0 384 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 DNAJC25Q9H1X3 360 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 BHMT2Q9H2M3 363 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 CRISPLD1Q9H336 500 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 POLR3BQ9NW08 1133 aaPredicted RBP12.36□□□□□ -0.43
SF3B2-208ENST00000529994 SLC27A5Q9Y2P5 690 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 KIF3AQ9Y496 699 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 ZFYVE26Q68DK2 2539 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 C1QTNF9BB2RNN3 333 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 H3BQV1 296 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 RPP40O75818 363 aaKnown RBP12.35□□□□□ -0.43
SF3B2-208ENST00000529994 SOAT2O75908 522 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 KCNK5O95279 499 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 C1QTNF9P0C862 333 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 CCDC192P0DO97 292 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 KCNE1P15382 129 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 RPA1P27694 616 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 MARCKSP29966 332 aaPredicted RBP12.35□□□□□ -0.43
SF3B2-208ENST00000529994 EPHB3P54753 998 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 PEX3P56589 373 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 SPAG1Q07617 926 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 TCEAL6Q6IPX3 200 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 PSAPL1Q6NUJ1 521 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 C1orf228Q6PIY5 440 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 CACNA2D4Q7Z3S7 1137 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 GAB3Q8WWW8 586 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 KIFAP3Q92845 792 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 TCEAL3Q969E4 200 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 ZBTB45Q96K62 511 aaPredicted RBP12.35□□□□□ -0.43
SF3B2-208ENST00000529994 MKNK1Q9BUB5 465 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 MRPL4Q9BYD3 311 aaKnown RBP12.35□□□□□ -0.43
SF3B2-208ENST00000529994 PTPRHQ9HD43 1115 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 CNTN3Q9P232 1028 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 TUBGCP4Q9UGJ1 667 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 PCDHB8Q9UN66 801 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 SMC3Q9UQE7 1217 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 ZNF638Q14966 1978 aaKnown RBP12.35□□□□□ -0.43
SF3B2-208ENST00000529994 ANK1P16157 1881 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 IGF2RP11717 2491 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 ZZEF1O43149 2961 aa12.35□□□□□ -0.43
SF3B2-208ENST00000529994 ASPMQ8IZT6 3477 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 EPN2O95208 641 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 PRAMEF12O95522 483 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 PROS1P07225 676 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 HOXB3P14651 431 aaPredicted RBP12.34□□□□□ -0.43
SF3B2-208ENST00000529994 HOXA6P31267 233 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 CCT6AP40227 531 aaKnown RBP12.34□□□□□ -0.43
SF3B2-208ENST00000529994 RAP1GAPP47736 663 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 NPTX2P47972 431 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 YWHAHQ04917 246 aaPredicted RBP12.34□□□□□ -0.43
SF3B2-208ENST00000529994 ARHGAP29Q52LW3 1261 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 GPR158Q5T848 1215 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 GAREM2Q75VX8 874 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 TAS1R3Q7RTX0 852 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 HAUS6Q7Z4H7 955 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 TTC9BQ8N6N2 239 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 SMG9Q9H0W8 520 aaKnown RBP12.34□□□□□ -0.43
SF3B2-208ENST00000529994 ATXN3LQ9H3M9 355 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 MAFFQ9ULX9 164 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 PCDHB6Q9Y5E3 794 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 PHLPP2Q6ZVD8 1323 aa12.34□□□□□ -0.43
SF3B2-208ENST00000529994 MYH11P35749 1972 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 ABLIM1O14639 778 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 GIPC1O14908 333 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 HIP1RO75146 1068 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 MCF2P10911 925 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 GABRR2P28476 465 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 MPLP40238 635 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 ALDH1A3P47895 512 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 MCM2P49736 904 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 CYP4F8P98187 520 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 CACNB1Q02641 598 aaPredicted RBP12.33□□□□□ -0.44
SF3B2-208ENST00000529994 SLC10A6Q3KNW5 377 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 PLA2G2CQ5R387 149 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 RNF43Q68DV7 783 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 MPZL3Q6UWV2 235 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 ATAD1Q8NBU5 361 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 BEST2Q8NFU1 509 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 LOXL4Q96JB6 756 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 LSM14BQ9BX40 385 aaKnown RBP12.33□□□□□ -0.44
SF3B2-208ENST00000529994 ANKFY1Q9P2R3 1169 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 ZMIZ1Q9ULJ6 1067 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 KIAA1024Q9UPX6 916 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 SPEGQ15772 3267 aa12.33□□□□□ -0.44
SF3B2-208ENST00000529994 OAZ2O95190 189 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 SPINK2P20155 84 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 PROZP22891 400 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 U2AF2P26368 475 aaKnown RBP eCLIP12.32□□□□□ -0.444e-7■■□□□ 12.3
SF3B2-208ENST00000529994 TRAPPC10P48553 1259 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 TOB1P50616 345 aaPredicted RBP12.32□□□□□ -0.44
SF3B2-208ENST00000529994 GUCY2FP51841 1108 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 DMP1Q13316 513 aaPredicted RBP12.32□□□□□ -0.44
SF3B2-208ENST00000529994 PLD1Q13393 1074 aa12.32□□□□□ -0.44
SF3B2-208ENST00000529994 ORC2Q13416 577 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms