RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 BEST2Q8NFU1 509 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 ERMNQ8TAM6 284 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 DDX12PQ92771 950 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 KCNB2Q92953 911 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 ZNF274Q96GC6 653 aaPredicted RBP9.73□□□□□ -0.85
PVT1-207ENST00000518528 TBC1D32Q96NH3 1257 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 ACAP3Q96P50 834 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 TCHPQ9BT92 498 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 CCDC113Q9H0I3 377 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 TASP1Q9H6P5 420 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 TUFT1Q9NNX1 390 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 GKN1Q9NS71 199 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 EBF1Q9UH73 591 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 TNFSF13BQ9Y275 285 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 USP20Q9Y2K6 914 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 NCANO14594 1321 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 RALGAPA1Q6GYQ0 2036 aa9.73□□□□□ -0.85
PVT1-207ENST00000518528 TDRD15B5MCY1 1934 aaKnown RBP9.72□□□□□ -0.85
PVT1-207ENST00000518528 NOTCH4Q99466 2003 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 DCLK1O15075 740 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 HYAL3O43820 417 aaPredicted RBP9.72□□□□□ -0.85
PVT1-207ENST00000518528 CDC45O75419 566 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 OAZ2O95190 189 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 SEC24BO95487 1268 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 TOP3BO95985 862 aaKnown RBP9.72□□□□□ -0.85
PVT1-207ENST00000518528 GABRR2P28476 465 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 HOXC13P31276 330 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 DPP6P42658 865 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 TXKP42681 527 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 DGKEP52429 567 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 OSTNP61366 133 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 SOX4Q06945 474 aaPredicted RBP9.72□□□□□ -0.85
PVT1-207ENST00000518528 BFSP1Q12934 665 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 RUNX3Q13761 415 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 ZNF568Q3ZCX4 644 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 STXBP5Q5T5C0 1151 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 NT5DC1Q5TFE4 455 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 FSTL4Q6MZW2 842 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 PKN3Q6P5Z2 889 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 PADI6Q6TGC4 694 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 ALKAL1Q6UXT8 129 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 SYT13Q7L8C5 426 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 TSTD1Q8NFU3 115 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 WASF1Q92558 559 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 KIFAP3Q92845 792 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 PSMG2Q969U7 264 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 AIFM3Q96NN9 605 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 LRRC3BQ96PB8 259 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 PGLYRP2Q96PD5 576 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 P2RY13Q9BPV8 354 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 NUSAP1Q9BXS6 441 aaKnown RBP9.72□□□□□ -0.85
PVT1-207ENST00000518528 LRRC3Q9BY71 257 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 SNX14Q9Y5W7 946 aa9.72□□□□□ -0.85
PVT1-207ENST00000518528 ZZEF1O43149 2961 aa9.71□□□□□ -0.85
PVT1-207ENST00000518528 A0A087WWV3 80 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 NEMFO60524 1076 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 EGFP01133 1207 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 MCF2P10911 925 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 HSPA4P34932 840 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 KRT2P35908 639 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 AVPR1AP37288 418 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 TUFMP49411 452 aaKnown RBP9.71□□□□□ -0.86
PVT1-207ENST00000518528 ATXN3P54252 364 aaPredicted RBP9.71□□□□□ -0.86
PVT1-207ENST00000518528 SIM1P81133 766 aaPredicted RBP9.71□□□□□ -0.86
PVT1-207ENST00000518528 CACNB1Q02641 598 aaPredicted RBP9.71□□□□□ -0.86
PVT1-207ENST00000518528 GPR17Q13304 367 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 MYBPC2Q14324 1141 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 DMC1Q14565 340 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 PDGFRLQ15198 375 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 PMS2CLQ68D20 193 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 LMBRD2Q68DH5 695 aaPredicted RBP9.71□□□□□ -0.86
PVT1-207ENST00000518528 GAREM2Q75VX8 874 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 HDDC3Q8N4P3 179 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 BSNDQ8WZ55 320 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 PIGKQ92643 395 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 MKNK1Q9BUB5 465 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 MRPL4Q9BYD3 311 aaKnown RBP9.71□□□□□ -0.86
PVT1-207ENST00000518528 DNAJC25Q9H1X3 360 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 CDT1Q9H211 546 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 KIF9Q9HAQ2 790 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 CNTN3Q9P232 1028 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 HSFX1Q9UBD0 423 aa9.71□□□□□ -0.86
PVT1-207ENST00000518528 EVLQ9UI08 416 aaPredicted RBP9.71□□□□□ -0.86
PVT1-207ENST00000518528 WDR81Q562E7 1941 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 CCDC169A6NNP5 214 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 CDX4O14627 284 aaPredicted RBP9.7□□□□□ -0.86
PVT1-207ENST00000518528 MAP3K13O43283 966 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 ALDH1A2O94788 518 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 PRAMEF12O95522 483 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 DDX6P26196 483 aaKnown RBP eCLIP9.7□□□□□ -0.86
PVT1-207ENST00000518528 DHPSP49366 369 aaPredicted RBP9.7□□□□□ -0.86
PVT1-207ENST00000518528 IRX4P78413 519 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 NR1H3Q13133 447 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 PSMD2Q13200 908 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 HNRNPDQ14103 355 aaKnown RBP9.7□□□□□ -0.86
PVT1-207ENST00000518528 ZNF423Q2M1K9 1284 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 CENPPQ6IPU0 288 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 DSTYKQ6XUX3 929 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 LPCAT2Q7L5N7 544 aa9.7□□□□□ -0.86
PVT1-207ENST00000518528 PDZD3Q86UT5 571 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms