RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 CACNG4Q9UBN1 327 aa5.84□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TTC3P53804 2025 aa5.84□□□□□ -1.48
SCARNA16.4-201ENST00000516956 TET1Q8NFU7 2136 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 PTPRJQ12913 1337 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 GOLGA6L3A6NEY3 463 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 OR6C75A6NL08 312 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 LGALS16A8MUM7 142 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 RBAK-RBAKDNI3L0D1 243 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 PRRG1O14668 218 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 PPEF2O14830 753 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 GRM6O15303 877 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 PMM2O15305 246 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 NCK2O43639 380 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 STAU1O95793 577 aaKnown RBP5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 ASS1P00966 412 aaKnown RBP5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 PDGFRBP09619 1106 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 CCDC172P0C7W6 258 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 CTSAP10619 480 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 KRT5P13647 590 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 FOSL2P15408 326 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 CD58P19256 250 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 TYMPP19971 482 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 RFX1P22670 979 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 TKTP29401 623 aaKnown RBP5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 NDUFV1P49821 464 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 WNT7BP56706 349 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 NOP14P78316 857 aaKnown RBP5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 RAPGEF1Q13905 1077 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 SYCP1Q15431 976 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 NAB2Q15742 525 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 NFE2Q16621 373 aaPredicted RBP5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 ARHGAP44Q17R89 818 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 UVSSAQ2YD98 709 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 CBWD6Q4V339 395 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 CBWD3Q5JTY5 395 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 CBWD5Q5RIA9 395 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 VARS2Q5ST30 1063 aaKnown RBP5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 LIN9Q5TKA1 542 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 GPR153Q6NV75 609 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 C4orf50Q6ZRC1 276 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 IRF2BP1Q8IU81 584 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 SPATA2LQ8IUW3 424 aaPredicted RBP5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 GLYCTKQ8IVS8 523 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 GPR65Q8IYL9 337 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 DEFB123Q8N688 67 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 SPATA18Q8TC71 538 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 PLEKHO2Q8TD55 490 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 MRPL38Q96DV4 380 aaKnown RBP5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 IQCDQ96DY2 449 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 BORCS6Q96GS4 357 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 LRCH3Q96II8 777 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 PAAF1Q9BRP4 392 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 MED10Q9BTT4 135 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 PI4K2AQ9BTU6 479 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 NUP58Q9BVL2 599 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 GPR62Q9BZJ7 368 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 IGFLR1Q9H665 355 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 UBE2TQ9NPD8 197 aaPredicted RBP5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 MARCH5Q9NX47 278 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 GDAP2Q9NXN4 497 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 DDX43Q9NXZ2 648 aaKnown RBP5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 LMCD1Q9NZU5 365 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 IFNKQ9P0W0 207 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 SIX4Q9UIU6 781 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 DAAM1Q9Y4D1 1078 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 PCDHB4Q9Y5E5 795 aa5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 TIMM13Q9Y5L4 95 aaPredicted RBP5.83□□□□□ -1.48
SCARNA16.4-201ENST00000516956 PDE4DIPQ5VU43 2346 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 M0QZQ0 153 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 RFXAPO00287 272 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 MEFVO15553 781 aaPredicted RBP5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 MED7O43513 233 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 B4GALT3O60512 393 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 TACC1O75410 805 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 VNN1O95497 513 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 GLUD1P00367 558 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 WEE2P0C1S8 567 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 ATP1A3P13637 1013 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 CD19P15391 556 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 ZNF18P17022 549 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 SLC9A1P19634 815 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 FGFR3P22607 806 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 WARSP23381 471 aaKnown RBP5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 ANXA13P27216 316 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 OR1D2P34982 312 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 ALDH1A3P47895 512 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 BPIFB4P59827 614 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 CYP27A1Q02318 531 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 DSG1Q02413 1049 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 SMARCB1Q12824 385 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 CUL2Q13617 745 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 VEPH1Q14D04 833 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 NCAPHQ15003 741 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 C1orf220Q5T0J3 134 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 WSCD1Q658N2 575 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 SPOPLQ6IQ16 392 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 TRIM65Q6PJ69 517 aa5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 PRSS55Q6UWB4 352 aaPredicted RBP5.82□□□□□ -1.48
SCARNA16.4-201ENST00000516956 C15orf39Q6ZRI6 1047 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms