RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 NECTIN4Q96NY8 510 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 NECAB3Q96P71 396 aaPredicted RBP12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 CGRRF1Q99675 332 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 PHF7Q9BWX1 381 aaPredicted RBP12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 CD320Q9NPF0 282 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 LMBRD1Q9NUN5 540 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 ZDHHC7Q9NXF8 308 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 GDAP2Q9NXN4 497 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 FBXW11Q9UKB1 542 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 MAN1B1Q9UKM7 699 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 DSEQ9UL01 958 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 MAFFQ9ULX9 164 aa12.02□□□□□ -0.49
SCARNA20-201ENST00000516768 VWA8A3KMH1 1905 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 WDR27A2RRH5 827 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 OR6C75A6NL08 312 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 RFPL2O75678 378 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 AKAP3O75969 853 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 C4BPAP04003 597 aaKnown RBP12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 WEE2P0C1S8 567 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 ODC1P11926 461 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 NR2F2P24468 414 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 AP3M2P53677 418 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 ROR1Q01973 937 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 ZP2Q05996 745 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 MYO1EQ12965 1108 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 MORC3Q14149 939 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 CAMK4Q16566 473 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 WSCD1Q658N2 575 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 CEP135Q66GS9 1140 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 ANKRD40Q6AI12 368 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 ZNF280DQ6N043 979 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 DPH6Q7L8W6 267 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 GJD3Q8N144 294 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 ZNF707Q96C28 371 aaPredicted RBP12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 DHTKD1Q96HY7 919 aaPredicted RBP12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 HPDLQ96IR7 371 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 ZNF560Q96MR9 790 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 PRKD2Q9BZL6 878 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 KIAA1468Q9P260 1216 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 CDH22Q9UJ99 828 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 R3HCC1Q9Y3T6 440 aaKnown RBP12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 ANK1P16157 1881 aa12.01□□□□□ -0.49
SCARNA20-201ENST00000516768 SCN1AP35498 2009 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 LRRIQ3A6PVS8 624 aaPredicted RBP12□□□□□ -0.49
SCARNA20-201ENST00000516768 LOC730098B7Z3J9 87 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 PPP1R3GB7ZBB8 358 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 HNRNPA1P09651 372 aaKnown RBP eCLIP12□□□□□ -0.49
SCARNA20-201ENST00000516768 FAM163BP0C2L3 166 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 CD44P16070 742 aaKnown RBP12□□□□□ -0.49
SCARNA20-201ENST00000516768 HOXA9P31269 272 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 ELF1P32519 619 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 PSMC2P35998 433 aaKnown RBP12□□□□□ -0.49
SCARNA20-201ENST00000516768 PPP1R2P41236 205 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 VAMP7P51809 220 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 PMS1P54277 932 aaKnown RBP12□□□□□ -0.49
SCARNA20-201ENST00000516768 ARPP19P56211 112 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 DLG4P78352 724 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 FKBP3Q00688 224 aaKnown RBP12□□□□□ -0.49
SCARNA20-201ENST00000516768 ENPEPQ07075 957 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 GPR17Q13304 367 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 RNF19BQ6ZMZ0 732 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 CCDC149Q6ZUS6 474 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 LIMS2Q7Z4I7 341 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 METTL23Q86XA0 190 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 TCEAL8Q8IYN2 117 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 THEM5Q8N1Q8 247 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 GBP4Q96PP9 640 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 RTP3Q9BQQ7 232 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 POMKQ9H5K3 350 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 AFF4Q9UHB7 1163 aaKnown RBP12□□□□□ -0.49
SCARNA20-201ENST00000516768 TTC28Q96AY4 2481 aa12□□□□□ -0.49
SCARNA20-201ENST00000516768 NCOR1O75376 2440 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 TNFRSF10AO00220 468 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 GABRDO14764 452 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 PSMA7O14818 248 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 CETN3O15182 167 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 HUS1O60921 280 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 SEC24AO95486 1093 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 C8AP07357 584 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 CCNE1P24864 410 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 LRRC63Q05C16 580 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 ADCY1Q08828 1119 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 BFSP1Q12934 665 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 STIM1Q13586 685 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 SOWAHAQ2M3V2 549 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 PPM1LQ5SGD2 360 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 C1orf220Q5T0J3 134 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 LIN9Q5TKA1 542 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 INTS8Q75QN2 995 aaKnown RBP11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 TMEM86AQ8N2M4 240 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 PDCL2Q8N4E4 241 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 TOP6BLQ8N6T0 577 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 TRIML1Q8N9V2 468 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 SLC7A14Q8TBB6 771 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 SPATA18Q8TC71 538 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 SMG7Q92540 1137 aaKnown RBP11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 EEF2KMTQ96G04 330 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 RPGRIP1Q96KN7 1286 aa11.99□□□□□ -0.49
SCARNA20-201ENST00000516768 MKNK1Q9BUB5 465 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms