RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 UBE2HP62256 183 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 POU5F1Q01860 360 aaKnown RBP10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 DPYDQ12882 1025 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 CUL4BQ13620 913 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 KYAT1Q16773 422 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 BMT2Q1RMZ1 405 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 ZNF568Q3ZCX4 644 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 NOMO2Q5JPE7 1267 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 FAM26FQ5R3K3 315 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 C2orf16Q68DN1 1984 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 TPRG1Q6ZUI0 275 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 STXBP4Q6ZWJ1 553 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 GET4Q7L5D6 327 aaPredicted RBP10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 GRAMD1CQ8IYS0 662 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 RNF169Q8NCN4 708 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 HELQQ8TDG4 1101 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 USP9XQ93008 2570 aaPredicted RBP10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 LPPQ93052 612 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 RNF39Q9H2S5 420 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 ZHX3Q9H4I2 956 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 PIDD1Q9HB75 910 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 TBC1D13Q9NVG8 400 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 KANSL3Q9P2N6 904 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 DPP7Q9UHL4 492 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 EXOC7Q9UPT5 735 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 MSRB2Q9Y3D2 182 aa10.2□□□□□ -0.78
CSNK1A1-206ENST00000515748 DOCK8Q8NF50 2099 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 TENM4Q6N022 2769 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 A0A0B4J269 797 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 ARL5CA6NH57 179 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 CLDN3O15551 220 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 CAPNS1P04632 268 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 LIG1P18858 919 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 AFMP43652 599 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 CXCL12P48061 93 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 LIG4P49917 911 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 CCR3P51677 355 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 DSC1Q08554 894 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 PSMD2Q13200 908 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 TMEM132AQ24JP5 1023 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 ZC2HC1CQ53FD0 456 aaPredicted RBP10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 XKR4Q5GH76 650 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 SH3PXD2AQ5TCZ1 1133 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 RNF43Q68DV7 783 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 SLC39A4Q6P5W5 647 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 CEP68Q76N32 757 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 CDR2LQ86X02 465 aaPredicted RBP10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 PROSER1Q86XN7 944 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 ZNF687Q8N1G0 1237 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 GSTCDQ8NEC7 633 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 SPATA20Q8TB22 786 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 URGCPQ8TCY9 931 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 TMEM174Q8WUU8 243 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 BCL7CQ8WUZ0 217 aaPredicted RBP10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 ACCSQ96QU6 501 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 VN1R3Q9BXE9 311 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 FGFBP2Q9BYJ0 223 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 BLZF1Q9H2G9 400 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 CHRDQ9H2X0 955 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 TMEM206Q9H813 350 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 TOPORSQ9NS56 1045 aaPredicted RBP10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 USP20Q9Y2K6 914 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 NEUROG3Q9Y4Z2 214 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 HES2Q9Y543 173 aa10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.19□□□□□ -0.78
CSNK1A1-206ENST00000515748 SHISA7A6NL88 538 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 ZC3H11AO75152 810 aaKnown RBP eCLIP10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 GADD45BO75293 160 aaPredicted RBP10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 RECQL4O94761 1208 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 RHOBTB3O94955 611 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 GCNT3O95395 438 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 PAPLNO95428 1278 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 GALTP07902 379 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 CEACAM1P13688 526 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 CASP1P29466 404 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 ADSSP30520 456 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 MLH1P40692 756 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 SNRPFP62306 86 aaKnown RBP10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 GRIK3Q13003 919 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 KCNB1Q14721 858 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 POSTNQ15063 836 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 SLFN12LQ6IEE8 588 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 ELMSAN1Q6PJG2 1045 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 ALKAL1Q6UXT8 129 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 LONP2Q86WA8 852 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 ZNF507Q8TCN5 953 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 SCFD1Q8WVM8 642 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 BICD1Q96G01 975 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 LOXL4Q96JB6 756 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 ZFP42Q96MM3 310 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 GBP4Q96PP9 640 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 GAD1Q99259 594 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 HNRNPABQ99729 332 aaKnown RBP10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 TMEM175Q9BSA9 504 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 CCDC94Q9BW85 323 aaPredicted RBP10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 GTPBP4Q9BZE4 634 aaKnown RBP10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 HAPLN2Q9GZV7 340 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 EXOC1Q9NV70 894 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 CNTN3Q9P232 1028 aa10.18□□□□□ -0.78
CSNK1A1-206ENST00000515748 STK39Q9UEW8 545 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms