RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 PCDHA5Q9Y5H7 936 aa8.84□□□□□ -0.99
NEDD4-210ENST00000513957 VCANP13611 3396 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 PSMA7O14818 248 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 LINC01565O15544 149 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 MBTPS2O43462 519 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 OAZ2O95190 189 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 STAU1O95793 577 aaKnown RBP8.83□□□□□ -1
NEDD4-210ENST00000513957 NR3C1P04150 777 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 CYP11A1P05108 521 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 BMP1P13497 986 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 NR2F2P24468 414 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 TKTP29401 623 aaKnown RBP8.83□□□□□ -1
NEDD4-210ENST00000513957 GTF2F1P35269 517 aaKnown RBP eCLIP8.83□□□□□ -1
NEDD4-210ENST00000513957 MTHFRP42898 656 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 BRCC3P46736 316 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 CYP2J2P51589 502 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 TFAMQ00059 246 aaKnown RBP8.83□□□□□ -1
NEDD4-210ENST00000513957 TFF2Q03403 129 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 YWHAHQ04917 246 aaPredicted RBP8.83□□□□□ -1
NEDD4-210ENST00000513957 DLX2Q07687 328 aaPredicted RBP8.83□□□□□ -1
NEDD4-210ENST00000513957 CYP24A1Q07973 514 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 SMARCB1Q12824 385 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 MYO1EQ12965 1108 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 RAB33AQ14088 237 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 MRPL58Q14197 206 aaKnown RBP8.83□□□□□ -1
NEDD4-210ENST00000513957 UVSSAQ2YD98 709 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 ZCWPW2Q504Y3 356 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 VARS2Q5ST30 1063 aaKnown RBP8.83□□□□□ -1
NEDD4-210ENST00000513957 TPGS2Q68CL5 300 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 EP400NLQ6ZTU2 488 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 INTS8Q75QN2 995 aaKnown RBP8.83□□□□□ -1
NEDD4-210ENST00000513957 DPH6Q7L8W6 267 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 TAS1R1Q7RTX1 841 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 CEP57Q86XR8 500 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 CBWD2Q8IUF1 395 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 C1orf127Q8N9H9 656 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 VN1R2Q8NFZ6 395 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.83□□□□□ -1
NEDD4-210ENST00000513957 AUTS2Q8WXX7 1259 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 SUSD6Q92537 303 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 RIPOR3Q96MK2 946 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 CGRRF1Q99675 332 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 TSG101Q99816 390 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 CLSTN3Q9BQT9 956 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 IKZF4Q9H2S9 585 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 PDE11AQ9HCR9 933 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 CACNG4Q9UBN1 327 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 FBXW11Q9UKB1 542 aa8.83□□□□□ -1
NEDD4-210ENST00000513957 BARX2Q9UMQ3 279 aaPredicted RBP8.83□□□□□ -1
NEDD4-210ENST00000513957 PTPRDP23468 1912 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 BICDL2A1A5D9 508 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 GOLGA8IPA6NC78 632 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 OR6C75A6NL08 312 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 GOLGA8JA6NMD2 632 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 KPNA7A9QM74 516 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 H3BQ06 376 aaPredicted RBP8.82□□□□□ -1
NEDD4-210ENST00000513957 IKBKBO14920 756 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 CLIC2O15247 247 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 SLC16A3O15427 465 aaKnown RBP8.82□□□□□ -1
NEDD4-210ENST00000513957 TGM5O43548 720 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 TBC1D4O60343 1298 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 GADD45BO75293 160 aaPredicted RBP8.82□□□□□ -1
NEDD4-210ENST00000513957 ITGB3P05106 788 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 HNRNPA1P09651 372 aaKnown RBP eCLIP8.82□□□□□ -1
NEDD4-210ENST00000513957 FAM163BP0C2L3 166 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 TNNI1P19237 187 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 ATICP31939 592 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 PSMC2P35998 433 aaKnown RBP8.82□□□□□ -1
NEDD4-210ENST00000513957 MCCD1P59942 119 aaPredicted RBP8.82□□□□□ -1
NEDD4-210ENST00000513957 RBP5P82980 135 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 SPAG1Q07617 926 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 CBX2Q14781 532 aaPredicted RBP8.82□□□□□ -1
NEDD4-210ENST00000513957 QPCTQ16769 361 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 LIN9Q5TKA1 542 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 ASTLQ6HA08 431 aaPredicted RBP8.82□□□□□ -1
NEDD4-210ENST00000513957 CENPPQ6IPU0 288 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 LLGL2Q6P1M3 1020 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 LILRA6Q6PI73 481 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 DSTYKQ6XUX3 929 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 CCDC149Q6ZUS6 474 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 ADHFE1Q8IWW8 467 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 TMEM86AQ8N2M4 240 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 ZNF461Q8TAF7 563 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 NOC3LQ8WTT2 800 aaKnown RBP8.82□□□□□ -1
NEDD4-210ENST00000513957 RABGGTAQ92696 567 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 DHTKD1Q96HY7 919 aaPredicted RBP8.82□□□□□ -1
NEDD4-210ENST00000513957 SENP8Q96LD8 212 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 MTMR12Q9C0I1 747 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 S1PR5Q9H228 398 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 MAN1C1Q9NR34 630 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 GDAP2Q9NXN4 497 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 HSFX1Q9UBD0 423 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 NCOR1O75376 2440 aa8.82□□□□□ -1
NEDD4-210ENST00000513957 MUC3AQ02505 3323 aa8.81□□□□□ -1
NEDD4-210ENST00000513957 CETN3O15182 167 aa8.81□□□□□ -1
NEDD4-210ENST00000513957 ABLIM3O94929 683 aa8.81□□□□□ -1
NEDD4-210ENST00000513957 DLATP10515 647 aaKnown RBP8.81□□□□□ -1
NEDD4-210ENST00000513957 KRT13P13646 458 aa8.81□□□□□ -1
NEDD4-210ENST00000513957 ATF2P15336 505 aa8.81□□□□□ -1
NEDD4-210ENST00000513957 TCF3P15923 654 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms