RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 OBSL1O75147 1896 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 C2orf16Q68DN1 1984 aa8.17□□□□□ -1.1
HMGXB3-204ENST00000513318 ARHGEF37A1IGU5 675 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 GTPBP10A4D1E9 387 aaKnown RBP8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 PPEF2O14830 753 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 TRAPPC3O43617 180 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 FGF18O76093 207 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 STAU1O95793 577 aaKnown RBP8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 HLA-DRAP01903 254 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 ITGB1P05556 798 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 CDK11BP21127 795 aaKnown RBP8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 ATICP31939 592 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 AARSP49588 968 aaKnown RBP eCLIP8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 PLCB3Q01970 1234 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 KRT17Q04695 432 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 UBE3AQ05086 875 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 CETN1Q12798 172 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 MYO1EQ12965 1108 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 TRPC3Q13507 836 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 NCOA4Q13772 614 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 KRT31Q15323 416 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 ZNF699Q32M78 642 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 CBWD6Q4V339 395 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 CBWD3Q5JTY5 395 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 CBWD5Q5RIA9 395 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 ZNF697Q5TEC3 545 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 THSD4Q6ZMP0 1018 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 SPRED2Q7Z698 418 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 RNF168Q8IYW5 571 aaPredicted RBP8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 TMEM130Q8N3G9 435 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 KLHL23Q8NBE8 558 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 CCDC150Q8NCX0 1101 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 TAS1R2Q8TE23 839 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 HASPINQ8TF76 798 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 TAF4BQ92750 862 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 DOCK6Q96HP0 2047 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 FAM84AQ96KN4 292 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 SUSD3Q96L08 255 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 ZNF576Q9H609 170 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 VRTNQ9H8Y1 702 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 BRWD1Q9NSI6 2320 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 MTUS1Q9ULD2 1270 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 AGAP1Q9UPQ3 857 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 LZTS1Q9Y250 596 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 COQ4Q9Y3A0 265 aa8.16□□□□□ -1.1
HMGXB3-204ENST00000513318 KPNA7A9QM74 516 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 F8W810 466 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 H3BNC9 293 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 M0QZQ0 153 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 SOX1O00570 391 aaPredicted RBP8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 SYN3O14994 580 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 TADA2AO75478 443 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 CLSTN1O94985 981 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 VNN1O95497 513 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 ASS1P00966 412 aaKnown RBP8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 CST3P01034 146 aaPredicted RBP8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 SOD2P04179 222 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 ODC1P11926 461 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 ATP1A3P13637 1013 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 BRCC3P46736 316 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 COPB1P53618 953 aaKnown RBP8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 LILRA4P59901 499 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 MYL6P60660 151 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 NOP14P78316 857 aaKnown RBP8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 GPM6BQ13491 265 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 SGSM1Q2NKQ1 1148 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 VWA3BQ502W6 1294 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 HABP4Q5JVS0 413 aaKnown RBP8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 MIIPQ5JXC2 388 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 CD300LGQ6UXG3 332 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 DDX53Q86TM3 631 aaKnown RBP8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 RNF214Q8ND24 703 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 BCL7CQ8WUZ0 217 aaPredicted RBP8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 ARNTL2Q8WYA1 636 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 RABGGTAQ92696 567 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 LRCH3Q96II8 777 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 HPDLQ96IR7 371 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 SENP8Q96LD8 212 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 HERC2P3Q9BVR0 1158 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 GPR62Q9BZJ7 368 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 LMAN2LQ9H0V9 348 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 NDST4Q9H3R1 872 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 CERS4Q9HA82 394 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 RAB20Q9NX57 234 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 GDAP2Q9NXN4 497 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 TAB2Q9NYJ8 693 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 GCNT4Q9P109 453 aa8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 LIMA1Q9UHB6 759 aaKnown RBP8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 PUF60Q9UHX1 559 aaKnown RBP8.15□□□□□ -1.1
HMGXB3-204ENST00000513318 CDH23Q9H251 3354 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 ANAPC1Q9H1A4 1944 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 LRRC10BA6NIK2 292 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 PES1O00541 588 aaKnown RBP8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 SPTLC1O15269 473 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 EFEMP2O95967 443 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 URODP06132 367 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 P4HA1P13674 534 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 TYMPP19971 482 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 GLUD2P49448 558 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms