RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 ACSBG1Q96GR2 724 aa6.78□□□□□ -1.32
CHD1-208ENST00000512392 CCDC140Q96MF4 163 aa6.78□□□□□ -1.32
CHD1-208ENST00000512392 TCHPQ9BT92 498 aa6.78□□□□□ -1.32
CHD1-208ENST00000512392 ANO3Q9BYT9 981 aa6.78□□□□□ -1.32
CHD1-208ENST00000512392 RNF208Q9H0X6 261 aa6.78□□□□□ -1.32
CHD1-208ENST00000512392 SEMA4AQ9H3S1 761 aa6.78□□□□□ -1.32
CHD1-208ENST00000512392 RNPEPQ9H4A4 650 aa6.78□□□□□ -1.32
CHD1-208ENST00000512392 USP36Q9P275 1121 aaKnown RBP6.78□□□□□ -1.32
CHD1-208ENST00000512392 ADGRE2Q9UHX3 823 aa6.78□□□□□ -1.32
CHD1-208ENST00000512392 TMEFF2Q9UIK5 374 aaPredicted RBP6.78□□□□□ -1.32
CHD1-208ENST00000512392 EXOC7Q9UPT5 735 aa6.78□□□□□ -1.32
CHD1-208ENST00000512392 PRAMEF27A3QJZ7 478 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 NUDT19A8MXV4 375 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 DCDC2CA8MYV0 355 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 PTGES3LE9PB15 166 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 PIP5K1BO14986 540 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 STX6O43752 255 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 SYNCRIPO60506 623 aaKnown RBP6.77□□□□□ -1.33
CHD1-208ENST00000512392 CLEC3AO75596 197 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 ADCY5O95622 1261 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 RGS2P41220 211 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 ATP5OP48047 213 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 ZNF445P59923 1031 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 CCNA1P78396 465 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 PRPF4BQ13523 1007 aaKnown RBP6.77□□□□□ -1.33
CHD1-208ENST00000512392 CEP55Q53EZ4 464 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 NFRKBQ6P4R8 1299 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 ISLR2Q6UXK2 745 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 MEX3BQ6ZN04 569 aaKnown RBP6.77□□□□□ -1.33
CHD1-208ENST00000512392 Q6ZS46 218 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 HDXQ7Z353 690 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 PXKQ7Z7A4 578 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 DCLK2Q8N568 766 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 CEP76Q8TAP6 659 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 BAHD1Q8TBE0 780 aaPredicted RBP6.77□□□□□ -1.33
CHD1-208ENST00000512392 GRK7Q8WTQ7 553 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 HSPH1Q92598 858 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 CUL5Q93034 780 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 VPS33AQ96AX1 596 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 NEK1Q96PY6 1258 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 CRACR2AQ9BSW2 395 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 TMPRSS13Q9BYE2 586 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 OPA3Q9H6K4 179 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 GP6Q9HCN6 339 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 SAYSD1Q9NPB0 183 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.77□□□□□ -1.33
CHD1-208ENST00000512392 CHCHD3Q9NX63 227 aaKnown RBP6.77□□□□□ -1.33
CHD1-208ENST00000512392 AIPL1Q9NZN9 384 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 DTNAQ9Y4J8 743 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 ADAM20O43506 726 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 ALX3O95076 343 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 HEXBP07686 556 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 BRAFP15056 766 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 RXRAP19793 462 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 THPOP40225 353 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 KCNC1P48547 511 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 RAD23AP54725 363 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 RABEP1Q15276 862 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 DUSP28Q4G0W2 176 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 CAVIN4Q5BKX8 364 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 ARHGAP11AQ6P4F7 1023 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 FRMD7Q6ZUT3 714 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 CCDC186Q7Z3E2 898 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 TMEM110Q86TL2 294 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 C12orf40Q86WS4 652 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 SCML4Q8N228 414 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 TCEANC2Q96MN5 208 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 ATP6V0BQ99437 205 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 GDF15Q99988 308 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 PRDM12Q9H4Q4 367 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 BRF2Q9HAW0 419 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 NAALADL1Q9UQQ1 740 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 CSADQ9Y600 493 aa6.77□□□□□ -1.33
CHD1-208ENST00000512392 RUSC2Q8N2Y8 1516 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 VGLL3A8MV65 326 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 LACTBL1A8MY62 500 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 M0QX08 132 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 PODXLO00592 558 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 ASAP2O43150 1006 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 DLGAP3O95886 979 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 PAHP00439 452 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 PDHBP11177 359 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 LCP1P13796 627 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 PTPN2P17706 415 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 CST5P28325 142 aaPredicted RBP6.76□□□□□ -1.33
CHD1-208ENST00000512392 HSPA1LP34931 641 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 SUMO3P55854 103 aaPredicted RBP6.76□□□□□ -1.33
CHD1-208ENST00000512392 BEX3Q00994 111 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 DSC2Q02487 901 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 ZBTB16Q05516 673 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 GALNT2Q10471 571 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 IL10RAQ13651 578 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 RAB30Q15771 203 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 CCDC157Q569K6 752 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 C3orf38Q5JPI3 329 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 MCTP2Q6DN12 878 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 ESRP1Q6NXG1 681 aaKnown RBP6.76□□□□□ -1.33
CHD1-208ENST00000512392 BORAQ6PGQ7 559 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 OLFM4Q6UX06 510 aa6.76□□□□□ -1.33
CHD1-208ENST00000512392 RGS9BPQ6ZS82 235 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms