RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 HIP1O00291 1037 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 SYPP08247 313 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 ITPKAP23677 461 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 RFC5P40937 340 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 CSRP3P50461 194 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 GALK1P51570 392 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 ARPP19P56211 112 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 LRCH2Q5VUJ6 765 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 B3GNT9Q6UX72 402 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 KIF2CQ99661 725 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 P2RY13Q9BPV8 354 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 POLR3CQ9BUI4 534 aaPredicted RBP8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 GKN1Q9NS71 199 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 BARHL2Q9NY43 387 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 ZBTB47Q9UFB7 747 aaPredicted RBP8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 DNMT3LQ9UJW3 386 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 TBX20Q9UMR3 447 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 YIPF1Q9Y548 306 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 STK24Q9Y6E0 443 aa8.52□□□□□ -1.04
DEPDC1B-205ENST00000512078 CITO14578 2027 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 ANK1P16157 1881 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 MYLKQ15746 1914 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 FAM205CA6NFA0 338 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 I3L4J1 428 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 B4GALT5O43286 388 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 PSMD10O75832 226 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 BRCC3P46736 316 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 CLCNKBP51801 687 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 NPEPPSP55786 919 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 PSMC5P62195 406 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 POU5F1BQ06416 359 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 PLD1Q13393 1074 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 MRPL58Q14197 206 aaKnown RBP8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 COLEC12Q5KU26 742 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 GPR158Q5T848 1215 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 C20orf194Q5TEA3 1177 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 CDR2LQ86X02 465 aaPredicted RBP8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 MARCH9Q86YJ5 346 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 C3orf58Q8NDZ4 430 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 EXOC6Q8TAG9 804 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 DNAJC25Q9H1X3 360 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 CXCL16Q9H2A7 254 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 TOR4AQ9NXH8 423 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 FBXL5Q9UKA1 691 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 PCOLCE2Q9UKZ9 415 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 TAF6LQ9Y6J9 622 aa8.52□□□□□ -1.05
DEPDC1B-205ENST00000512078 UBR5O95071 2799 aaPredicted RBP8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 CREBBPQ92793 2442 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 NOTCH2Q04721 2471 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 CCDC69A6NI79 296 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 H7C4K7 107 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 SH2B2O14492 632 aaPredicted RBP8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 SYN3O14994 580 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 RECQL4O94761 1208 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 PSMD2Q13200 908 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 MXD4Q14582 209 aaPredicted RBP8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 NBR1Q14596 966 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 EMC2Q15006 297 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 UPP1Q16831 310 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 TAF1BQ53T94 588 aaPredicted RBP8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 ANKRD45Q5TZF3 282 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 NAIF1Q69YI7 327 aaPredicted RBP8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 TRIM68Q6AZZ1 485 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 NFXL1Q6ZNB6 911 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 GAREM2Q75VX8 874 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 TMTC2Q8N394 836 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 ZNF579Q8NAF0 562 aaKnown RBP8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 FANCBQ8NB91 859 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 CCDC26Q8TAB7 109 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 BAHD1Q8TBE0 780 aaPredicted RBP8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 RLN3Q8WXF3 142 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 CEP170P1Q96L14 293 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 UROC1Q96N76 676 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 TBC1D32Q96NH3 1257 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 NFKBIZQ9BYH8 718 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 IL25Q9H293 177 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 EBF3Q9H4W6 596 aa8.51□□□□□ -1.05
DEPDC1B-205ENST00000512078 ESYT2A0FGR8 921 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 TBX3O15119 743 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 RRP8O43159 456 aaKnown RBP8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 TLX3O43711 291 aaPredicted RBP8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 SLC28A2O43868 658 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 ALDH1A2O94788 518 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 FGF19O95750 216 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 U2AF2P26368 475 aaKnown RBP eCLIP8.5□□□□□ -1.054e-6■■□□□ 13.2
DEPDC1B-205ENST00000512078 GJA4P35212 333 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 TFDP1Q14186 410 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 CRY1Q16526 586 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 MAP7D1Q3KQU3 841 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 ARHGAP15Q53QZ3 475 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 CASC1Q6TDU7 716 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 RAB11FIP4Q86YS3 637 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 FRMD1Q8N878 549 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 BEST2Q8NFU1 509 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 USP33Q8TEY7 942 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 WHAMMQ8TF30 809 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 CD101Q93033 1021 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 GJA10Q969M2 543 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 ATXN3LQ9H3M9 355 aa8.5□□□□□ -1.05
DEPDC1B-205ENST00000512078 TASP1Q9H6P5 420 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms