RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 KLRC2P26717 231 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 GNA15P30679 374 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 GLUD2P49448 558 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 SLC12A3P55017 1021 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 RESTQ13127 1097 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 TUSC3Q13454 348 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 NAB2Q15742 525 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 DCAF4L1Q3SXM0 396 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 GLRA4Q5JXX5 417 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 KIAA0319Q5VV43 1072 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 FUT10Q6P4F1 479 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 FAM173BQ6P4H8 233 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 ZNF438Q7Z4V0 828 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 CEP120Q8N960 986 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 SYT2Q8N9I0 419 aaPredicted RBP9.43□□□□□ -0.9
PDPN-209ENST00000510906 HASPINQ8TF76 798 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 CDK5RAP3Q96JB5 506 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 AK8Q96MA6 479 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 FBXL18Q96ME1 805 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 ACO2Q99798 780 aaKnown RBP9.43□□□□□ -0.9
PDPN-209ENST00000510906 TARS2Q9BW92 718 aaKnown RBP9.43□□□□□ -0.9
PDPN-209ENST00000510906 EMILIN2Q9BXX0 1053 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 NT5C3AQ9H0P0 336 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 CDT1Q9H211 546 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 ADAM7Q9H2U9 754 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 POMKQ9H5K3 350 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 DZANK1Q9NVP4 752 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 STK39Q9UEW8 545 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 FOXD3Q9UJU5 478 aaPredicted RBP9.43□□□□□ -0.9
PDPN-209ENST00000510906 TNFSF13BQ9Y275 285 aa9.43□□□□□ -0.9
PDPN-209ENST00000510906 SETXQ7Z333 2677 aaKnown RBP9.42□□□□□ -0.9
PDPN-209ENST00000510906 ABLIM1O14639 778 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 TEX28O15482 410 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 KIF4AO95239 1232 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 BMP15O95972 392 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 THP07101 528 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 MYBP10242 640 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 PLS3P13797 630 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 PDCP20941 246 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 SYT1P21579 422 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 UBA7P41226 1012 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 CLCN4P51793 760 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 DSG1Q02413 1049 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 PTSQ03393 145 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 ITIH3Q06033 890 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 DHX8Q14562 1220 aaKnown RBP9.42□□□□□ -0.9
PDPN-209ENST00000510906 HSP90AA2PQ14568 343 aaPredicted RBP9.42□□□□□ -0.9
PDPN-209ENST00000510906 KARSQ15046 597 aaKnown RBP9.42□□□□□ -0.9
PDPN-209ENST00000510906 ZNF568Q3ZCX4 644 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 ARSHQ5FYA8 562 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 HERC4Q5GLZ8 1057 aaPredicted RBP9.42□□□□□ -0.9
PDPN-209ENST00000510906 EFHC2Q5JST6 749 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 KIAA1841Q6NSI8 718 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 CES5AQ6NT32 575 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 TMC5Q6UXY8 1006 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 PPFIBP1Q86W92 1011 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 TIPINQ9BVW5 301 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 MRPL4Q9BYD3 311 aaKnown RBP9.42□□□□□ -0.9
PDPN-209ENST00000510906 C17orf75Q9HAS0 396 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 RXFP1Q9HBX9 757 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 PTPRHQ9HD43 1115 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 CHST7Q9NS84 486 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 BLOC1S4Q9NUP1 217 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 TMEM63CQ9P1W3 806 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 DACH1Q9UI36 760 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 ADAM28Q9UKQ2 775 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 CLIC4Q9Y696 253 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 CHD6Q8TD26 2715 aa9.42□□□□□ -0.9
PDPN-209ENST00000510906 CACNA1BQ00975 2339 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 K7ELQ4 463 aaPredicted RBP9.41□□□□□ -0.9
PDPN-209ENST00000510906 XYLBO75191 536 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 TADA2AO75478 443 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 HARSP12081 509 aaKnown RBP9.41□□□□□ -0.9
PDPN-209ENST00000510906 RPL17P18621 184 aaKnown RBP9.41□□□□□ -0.9
PDPN-209ENST00000510906 PLCG1P19174 1290 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 PROZP22891 400 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 IGFBP6P24592 240 aaPredicted RBP9.41□□□□□ -0.9
PDPN-209ENST00000510906 MARCKSP29966 332 aaPredicted RBP9.41□□□□□ -0.9
PDPN-209ENST00000510906 LONP1P36776 959 aaKnown RBP9.41□□□□□ -0.9
PDPN-209ENST00000510906 MTHFRP42898 656 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 OSTNP61366 133 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 PTPAQ15257 358 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 USP41Q3LFD5 358 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 SPECC1Q5M775 1068 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 RTP2Q5QGT7 225 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 FIGNL1Q6PIW4 674 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 USP49Q70CQ1 688 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 GPBP1Q86WP2 473 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 TMEM161BQ8NDZ6 487 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 RIN2Q8WYP3 895 aaPredicted RBP9.41□□□□□ -0.9
PDPN-209ENST00000510906 CALML4Q96GE6 196 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 INTS4Q96HW7 963 aaKnown RBP9.41□□□□□ -0.9
PDPN-209ENST00000510906 ZBTB45Q96K62 511 aaPredicted RBP9.41□□□□□ -0.9
PDPN-209ENST00000510906 RIPOR3Q96MK2 946 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 FRMD6Q96NE9 622 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 NECTIN4Q96NY8 510 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 REEP2Q9BRK0 252 aa9.41□□□□□ -0.9
PDPN-209ENST00000510906 NTPCRQ9BSD7 190 aaKnown RBP9.41□□□□□ -0.9
PDPN-209ENST00000510906 ZCCHC2Q9C0B9 1178 aaKnown RBP9.41□□□□□ -0.9
PDPN-209ENST00000510906 SFXN1Q9H9B4 322 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms