RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	COBLL1	Q53SF7	1204 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	GLB1L	Q6UWU2	654 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	UNQ6494/PRO21346	Q6UXR6	183 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	TMC5	Q6UXY8	1006 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	TMC7	Q7Z402	723 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	GRAMD1C	Q8IYS0	662 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	KDF1	Q8NAX2	398 aa	Predicted RBP	11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	SMG8	Q8ND04	991 aa	Known RBP	11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	GPR152	Q8TDT2	470 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	TMEM174	Q8WUU8	243 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	NELL1	Q92832	810 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	EIF2A	Q9BY44	585 aa	Known RBP	11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	RSAD1	Q9HA92	442 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	ARHGEF3	Q9NR81	526 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	PUF60	Q9UHX1	559 aa	Known RBP	11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	DOCK6	Q96HP0	2047 aa		11.18	□□□□□ -0.62
PTPN20-222	ENST00000509774	ADAMTS20	P59510	1910 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	LOC400499	M0QZD8	3231 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774		A0A0B4J269	797 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	ABLIM1	O14639	778 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	OFD1	O75665	1012 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	NPTXR	O95502	500 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	CLTA	P09496	248 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	SRF	P11831	508 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	EPCAM	P16422	314 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	IBSP	P21815	317 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	PPP1R2	P41236	205 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	GRM5	P41594	1212 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	CSTF1	Q05048	431 aa	Known RBP	11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	RING1	Q06587	406 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	ZNF568	Q3ZCX4	644 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	AGMO	Q6ZNB7	445 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	CCDC149	Q6ZUS6	474 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	CD302	Q8IX05	232 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	SYCP3	Q8IZU3	236 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	GOLGA5	Q8TBA6	731 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	URGCP	Q8TCY9	931 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	SMARCE1	Q969G3	411 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	CASD1	Q96PB1	797 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	CCDC94	Q9BW85	323 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	GBP3	Q9H0R5	595 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	PLEKHA5	Q9HAU0	1116 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	KIAA1586	Q9HCI6	787 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	DZANK1	Q9NVP4	752 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	ZSCAN32	Q9NX65	697 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	TBC1D7	Q9P0N9	293 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	GMEB2	Q9UKD1	530 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	FCF1	Q9Y324	198 aa	Known RBP	11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	PCDHA5	Q9Y5H7	936 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	WDFY3	Q8IZQ1	3526 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	IGSF10	Q6WRI0	2623 aa		11.17	□□□□□ -0.62
PTPN20-222	ENST00000509774	TAF4	O00268	1085 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	OGT	O15294	1046 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	LAMTOR5	O43504	91 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	TBC1D4	O60343	1298 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	MBD3	O95983	291 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	EDN1	P05305	212 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	MYB	P10242	640 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	LAG3	P18627	525 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	CASP1	P29466	404 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	PBX3	P40426	434 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	YARS	P54577	528 aa	Known RBP	11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	STK4	Q13043	487 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	PNOC	Q13519	176 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	MYBPC2	Q14324	1141 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	SMC1A	Q14683	1233 aa	Known RBP	11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	KNOP1	Q1ED39	458 aa	Known RBP	11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	XKR4	Q5GH76	650 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	NOMO2	Q5JPE7	1267 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	EEF1DP3	Q658K8	133 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	HS2ST1	Q7LGA3	356 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	GPR149	Q86SP6	731 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	GPIHBP1	Q8IV16	184 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	LRRC43	Q8N309	656 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	GUF1	Q8N442	669 aa	Known RBP	11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	SLC44A3	Q8N4M1	653 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	TRIML1	Q8N9V2	468 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	RNF169	Q8NCN4	708 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	SCFD1	Q8WVM8	642 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	ACAP3	Q96P50	834 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	CDT1	Q9H211	546 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	SLC39A2	Q9NP94	309 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	RNF19A	Q9NV58	838 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	STK39	Q9UEW8	545 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	SLC27A5	Q9Y2P5	690 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	BPTF	Q12830	3046 aa		11.16	□□□□□ -0.62
PTPN20-222	ENST00000509774	SDK1	Q7Z5N4	2213 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	SMG1	Q96Q15	3661 aa	Known RBP	11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	ARL5C	A6NH57	179 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	SRRM3	A6NNA2	597 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	CYSRT1	A8MQ03	144 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	PDXK	O00764	312 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	PRPF6	O94906	941 aa	Known RBP	11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	ADRB2	P07550	413 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	FGFR1	P11362	822 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	MCM4	P33991	863 aa		11.15	□□□□□ -0.62
PTPN20-222	ENST00000509774	MATR3	P43243	847 aa	Known RBP eCLIP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms