RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 APBB1IPQ7Z5R6 666 aaPredicted RBP6.31□□□□□ -1.4
GYPB-208ENST00000507009 LONP2Q86WA8 852 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 CATSPER3Q86XQ3 398 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 MAP4K3Q8IVH8 894 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 SCUBE3Q8IX30 993 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 SPEM1Q8N4L4 309 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 NECAB1Q8N987 351 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 RDH13Q8NBN7 331 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 SHKBP1Q8TBC3 707 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 DEPDC1BQ8WUY9 529 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 WASF1Q92558 559 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 RSPRY1Q96DX4 576 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 NACC1Q96RE7 527 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 TCHPQ9BT92 498 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 CCDC113Q9H0I3 377 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 CDT1Q9H211 546 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 TMEM60Q9H2L4 133 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 TOPORSQ9NS56 1045 aaPredicted RBP6.31□□□□□ -1.4
GYPB-208ENST00000507009 RXFP3Q9NSD7 469 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 CEP72Q9P209 647 aa6.31□□□□□ -1.4
GYPB-208ENST00000507009 TIMM13Q9Y5L4 95 aaPredicted RBP6.31□□□□□ -1.4
GYPB-208ENST00000507009 STK36Q9NRP7 1315 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 SPECC1L-ADORA2AF8WAN1 911 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 K7ESF4 209 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 GPR37O15354 613 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 EXTL3O43909 919 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 MOSPD3O75425 235 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 ABLIM3O94929 683 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 CTDNEP1O95476 244 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 SPATA31C1P0DKV0 1188 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 CYP11B2P19099 503 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 SPINK2P20155 84 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 MATR3P43243 847 aaKnown RBP eCLIP6.3□□□□□ -1.4
GYPB-208ENST00000507009 RBM25P49756 843 aaKnown RBP6.3□□□□□ -1.4
GYPB-208ENST00000507009 PEX3P56589 373 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 TNK2Q07912 1038 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 FOXC1Q12948 553 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 COL9A2Q14055 689 aaPredicted RBP6.3□□□□□ -1.4
GYPB-208ENST00000507009 ZNF174Q15697 407 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 GPR158Q5T848 1215 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 ZNF280DQ6N043 979 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 PSAPL1Q6NUJ1 521 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 TXNDC11Q6PKC3 985 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 HAUS6Q7Z4H7 955 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 KBTBD6Q86V97 674 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 MFSD6LQ8IWD5 586 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 DIS3L2Q8IYB7 885 aaKnown RBP6.3□□□□□ -1.4
GYPB-208ENST00000507009 TCEAL8Q8IYN2 117 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 FAM177A1Q8N128 213 aaPredicted RBP6.3□□□□□ -1.4
GYPB-208ENST00000507009 ERMNQ8TAM6 284 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 DDX1Q92499 740 aaKnown RBP6.3□□□□□ -1.4
GYPB-208ENST00000507009 ZMAT2Q96NC0 199 aaKnown RBP6.3□□□□□ -1.4
GYPB-208ENST00000507009 TBC1D32Q96NH3 1257 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 IER2Q9BTL4 223 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 TARS2Q9BW92 718 aaKnown RBP6.3□□□□□ -1.4
GYPB-208ENST00000507009 SMG9Q9H0W8 520 aaKnown RBP6.3□□□□□ -1.4
GYPB-208ENST00000507009 TUFT1Q9NNX1 390 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 AVENQ9NQS1 362 aaPredicted RBP6.3□□□□□ -1.4
GYPB-208ENST00000507009 SH2B1Q9NRF2 756 aaPredicted RBP6.3□□□□□ -1.4
GYPB-208ENST00000507009 SLC38A7Q9NVC3 462 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 POLR3BQ9NW08 1133 aaPredicted RBP6.3□□□□□ -1.4
GYPB-208ENST00000507009 GTSE1Q9NYZ3 720 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 ANKFY1Q9P2R3 1169 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 TUBGCP4Q9UGJ1 667 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 AFF4Q9UHB7 1163 aaKnown RBP6.3□□□□□ -1.4
GYPB-208ENST00000507009 TPCN1Q9ULQ1 816 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 SLC27A5Q9Y2P5 690 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 YIPF1Q9Y548 306 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 USP24Q9UPU5 2620 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 CACNA1GO43497 2377 aa6.3□□□□□ -1.4
GYPB-208ENST00000507009 GREB1Q4ZG55 1949 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 C1QTNF9BB2RNN3 333 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 CITO14578 2027 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 SYN3O14994 580 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 CHADO15335 359 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 PFKFB2O60825 505 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 RPP40O75818 363 aaKnown RBP6.29□□□□□ -1.4
GYPB-208ENST00000507009 C1QTNF9P0C862 333 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 XRCC6P12956 609 aaKnown RBP eCLIP6.29□□□□□ -1.4
GYPB-208ENST00000507009 CTHP32929 405 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 CNR2P34972 360 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 CCT6AP40227 531 aaKnown RBP6.29□□□□□ -1.4
GYPB-208ENST00000507009 GRM5P41594 1212 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 ALDH1A3P47895 512 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 EFNA5P52803 228 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 EPHB3P54753 998 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 CYP4F8P98187 520 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 YWHAHQ04917 246 aaPredicted RBP6.29□□□□□ -1.4
GYPB-208ENST00000507009 DUSP4Q13115 394 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 ZRSR1Q15695 479 aaKnown RBP6.29□□□□□ -1.4
GYPB-208ENST00000507009 PKDCCQ504Y2 493 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 WDR44Q5JSH3 913 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 PLA2G2CQ5R387 149 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 STPG1Q5TH74 334 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 TPGS2Q68CL5 300 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 TCEAL6Q6IPX3 200 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 PKN3Q6P5Z2 889 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 DSTYKQ6XUX3 929 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 RTL10Q7L3V2 364 aa6.29□□□□□ -1.4
GYPB-208ENST00000507009 CACNA2D4Q7Z3S7 1137 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms