RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 NDUFB10O96000 172 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 ATP5OP48047 213 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 COG7P83436 770 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 MPP2Q14168 576 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 HIF1AQ16665 826 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 ARMC3Q5W041 872 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 TLDC1Q6P9B6 456 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 SLC25A41Q8N5S1 370 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 PCDHB18PQ96TA0 734 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 ARHGEF3Q9NR81 526 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 NCANO14594 1321 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 BCL9O00512 1426 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 DENND3A2RUS2 1198 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 SMNDC1O75940 238 aaKnown RBP eCLIP8.42□□□□□ -1.06
PROM1-206ENST00000505450 TJP3O95049 919 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 ETS1P14921 441 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 ALDH18A1P54886 795 aaKnown RBP8.42□□□□□ -1.06
PROM1-206ENST00000505450 PSMD6Q15008 389 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 DNAJC24Q6P3W2 148 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 RGS9BPQ6ZS82 235 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 CASZ1Q86V15 1759 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 RBBP8NLQ8NC74 664 aaPredicted RBP8.42□□□□□ -1.06
PROM1-206ENST00000505450 SLC26A7Q8TE54 656 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 TTC25Q96NG3 672 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 MOV10L1Q9BXT6 1211 aaKnown RBP8.42□□□□□ -1.06
PROM1-206ENST00000505450 DCLK3Q9C098 648 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 C10orf88Q9H8K7 445 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 PCSK1NQ9UHG2 260 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 R3HDM2Q9Y2K5 976 aaKnown RBP8.42□□□□□ -1.06
PROM1-206ENST00000505450 SLC4A7Q9Y6M7 1214 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 MYH3P11055 1940 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 CCDC189A1A4V9 331 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 SPECC1L-ADORA2AF8WAN1 911 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 COPEO14579 308 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 BANF1O75531 89 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 CHRM1P11229 460 aaPredicted RBP8.42□□□□□ -1.06
PROM1-206ENST00000505450 SERPINB3P29508 390 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 SSTR1P30872 391 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 ARL4CP56559 192 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 BPIFB4P59827 614 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 LAMB3Q13751 1172 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 SNRNP35Q16560 246 aaKnown RBP8.42□□□□□ -1.06
PROM1-206ENST00000505450 CEP55Q53EZ4 464 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 RASSF3Q86WH2 238 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 RFX6Q8HWS3 928 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 PIP4K2CQ8TBX8 421 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 TAS1R2Q8TE23 839 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 EPS8L1Q8TE68 723 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 FAM111AQ96PZ2 611 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 TUBB6Q9BUF5 446 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 DENND2DQ9H6A0 471 aaPredicted RBP8.42□□□□□ -1.06
PROM1-206ENST00000505450 KCNMB3Q9NPA1 279 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 DDX4Q9NQI0 724 aaKnown RBP8.42□□□□□ -1.06
PROM1-206ENST00000505450 OLFML3Q9NRN5 406 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 MRPL11Q9Y3B7 192 aaKnown RBP8.42□□□□□ -1.06
PROM1-206ENST00000505450 PCDHA2Q9Y5H9 948 aa8.42□□□□□ -1.06
PROM1-206ENST00000505450 COL1A1P02452 1464 aaPredicted RBP8.41□□□□□ -1.06
PROM1-206ENST00000505450 TMEM150BA6NC51 233 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 TBX3O15119 743 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 EIF2AK2P19525 551 aaKnown RBP8.41□□□□□ -1.06
PROM1-206ENST00000505450 STAT2P52630 851 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 JAM2P57087 298 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 PPP2R5CQ13362 524 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 SHROOM1Q2M3G4 852 aaPredicted RBP8.41□□□□□ -1.06
PROM1-206ENST00000505450 ATP13A4Q4VNC1 1196 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 LGSNQ5TDP6 509 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 RNF43Q68DV7 783 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 ACAD10Q6JQN1 1059 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 SCYL2Q6P3W7 929 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 MOB2Q70IA6 237 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 MIPOL1Q8TD10 442 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 ZNF75CPQ92670 426 aaPredicted RBP8.41□□□□□ -1.06
PROM1-206ENST00000505450 MANSC1Q9H8J5 431 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 PSMC3IPQ9P2W1 217 aaPredicted RBP8.41□□□□□ -1.06
PROM1-206ENST00000505450 PI4KBQ9UBF8 816 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 CHMP2BQ9UQN3 213 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 SCN11AQ9UI33 1791 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 A0A1W2PPM1 405 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 SLITRK3O94933 977 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 GZMAP12544 262 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 PECAM1P16284 738 aaPredicted RBP8.41□□□□□ -1.06
PROM1-206ENST00000505450 CYP2B6P20813 491 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 BRD2P25440 801 aaKnown RBP8.41□□□□□ -1.06
PROM1-206ENST00000505450 KCTD2Q14681 263 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 NBPF20Q3BBV1 942 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 EEPD1Q7L9B9 569 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 LRRC6Q86X45 466 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 ST13P4Q8IZP2 240 aaPredicted RBP8.41□□□□□ -1.06
PROM1-206ENST00000505450 CEP170P1Q96L14 293 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 IFT122Q9HBG6 1241 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 ETAA1Q9NY74 926 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 TXNDC16Q9P2K2 825 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 CHKBQ9Y259 395 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 MYH1P12882 1939 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 MYH4Q9Y623 1939 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 CREB3O43889 395 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 ARP10275 920 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 NCF2P19878 526 aaPredicted RBP8.41□□□□□ -1.06
PROM1-206ENST00000505450 ATP6V1C1P21283 382 aa8.41□□□□□ -1.06
PROM1-206ENST00000505450 POU5F1Q01860 360 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms