RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 RASSF1Q9NS23 344 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 CROTQ9UKG9 612 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 GJD2Q9UKL4 321 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 POLHQ9Y253 713 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 RABGAP1Q9Y3P9 1069 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 KIF3AQ9Y496 699 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 PCDHGB6Q9Y5F9 930 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 PCDHGB3Q9Y5G1 929 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 LRRFIP2Q9Y608 721 aaKnown RBP4.72□□□□□ -1.65
RFC1-208ENST00000504849 LRRC7Q96NW7 1537 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 CPSF1Q10570 1443 aaKnown RBP4.72□□□□□ -1.65
RFC1-208ENST00000504849 PPLO60437 1756 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 ATP7BP35670 1465 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 A0A0U1RQG5 324 aaPredicted RBP4.71□□□□□ -1.66
RFC1-208ENST00000504849 A0A1B0GVC2 190 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 C7orf72A4D263 438 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 CAPN8A6NHC0 703 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 KLHL18O94889 574 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 MYBP10242 640 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 ACRV1P26436 265 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 CHKAP35790 457 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 KIF11P52732 1056 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 NKX3-2P78367 333 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 MRPS9P82933 396 aaKnown RBP4.71□□□□□ -1.66
RFC1-208ENST00000504849 KIF23Q02241 960 aaPredicted RBP4.71□□□□□ -1.66
RFC1-208ENST00000504849 PPFIA1Q13136 1202 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 CUL4AQ13619 759 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 MOGSQ13724 837 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 POLD3Q15054 466 aaPredicted RBP4.71□□□□□ -1.66
RFC1-208ENST00000504849 INTS11Q5TA45 600 aaKnown RBP4.71□□□□□ -1.66
RFC1-208ENST00000504849 CC2D1AQ6P1N0 951 aaPredicted RBP4.71□□□□□ -1.66
RFC1-208ENST00000504849 KCNK18Q7Z418 384 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 RALYLQ86SE5 291 aaKnown RBP4.71□□□□□ -1.66
RFC1-208ENST00000504849 NME9Q86XW9 330 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 ANKRD18AQ8IVF6 992 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 THEMISQ8N1K5 641 aaPredicted RBP4.71□□□□□ -1.66
RFC1-208ENST00000504849 PDCL2Q8N4E4 241 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 PPP1R35Q8TAP8 253 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 TGFBRAP1Q8WUH2 860 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 LRTOMTQ8WZ04 291 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 DPF3Q92784 378 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 COA7Q96BR5 231 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 CLIC6Q96NY7 704 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 TTPALQ9BTX7 342 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 B3GNT5Q9BYG0 378 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 AP5M1Q9H0R1 490 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 CDIP1Q9H305 208 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 DMRT3Q9NQL9 472 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 PRDM4Q9UKN5 801 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 TIMM13Q9Y5L4 95 aaPredicted RBP4.71□□□□□ -1.66
RFC1-208ENST00000504849 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.71□□□□□ -1.66
RFC1-208ENST00000504849 ANKRD26Q9UPS8 1709 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 RGS12O14924 1447 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 NPATQ14207 1427 aa4.71□□□□□ -1.66
RFC1-208ENST00000504849 CDK12Q9NYV4 1490 aaPredicted RBP4.7□□□□□ -1.66
RFC1-208ENST00000504849 H7BY64 318 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 J3KRW8 73 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 DVL2O14641 736 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 FYB1O15117 783 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 RAD17O75943 681 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 AGR2O95994 175 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 ZNF853P0CG23 659 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 COPB2P35606 906 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 PPM1AP35813 382 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 IL6STP40189 918 aaPredicted RBP4.7□□□□□ -1.66
RFC1-208ENST00000504849 PRIM2P49643 509 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 CCT4P50991 539 aaKnown RBP4.7□□□□□ -1.66
RFC1-208ENST00000504849 CASP5P51878 434 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 JAM2P57087 298 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 C21orf58P58505 322 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 RPL11P62913 178 aaKnown RBP4.7□□□□□ -1.66
RFC1-208ENST00000504849 SRSF2Q01130 221 aaKnown RBP4.7□□□□□ -1.66
RFC1-208ENST00000504849 ICA1Q05084 483 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 SPIRE1Q08AE8 756 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 PDE1CQ14123 709 aaPredicted RBP4.7□□□□□ -1.66
RFC1-208ENST00000504849 NOLC1Q14978 699 aaKnown RBP eCLIP4.7□□□□□ -1.66
RFC1-208ENST00000504849 EPHA7Q15375 998 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 SYCP1Q15431 976 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 UAP1L1Q3KQV9 507 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 FIGNQ5HY92 759 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 TOR2AQ5JU69 321 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 IZUMO3Q5VZ72 239 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 MBLAC2Q68D91 279 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 CEP85Q6P2H3 762 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 NPNTQ6UXI9 565 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 RSRC2Q7L4I2 434 aaKnown RBP4.7□□□□□ -1.66
RFC1-208ENST00000504849 MAATS1Q7Z4T9 603 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 OSTM1Q86WC4 334 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 PRIMA1Q86XR5 153 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 NOSTRINQ8IVI9 506 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 SEC14L1Q92503 715 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 PHKBQ93100 1093 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 ARL8AQ96BM9 186 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 RAX2Q96IS3 184 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 TMX3Q96JJ7 454 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 MAML3Q96JK9 1138 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 STARD7Q9NQZ5 370 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 GPRC5BQ9NZH0 403 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 PDP2Q9P2J9 529 aa4.7□□□□□ -1.66
RFC1-208ENST00000504849 POLG2Q9UHN1 485 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms