RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 LGR5O75473 907 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 DNAJC8O75937 253 aaPredicted RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 FARP2O94887 1054 aaPredicted RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 TNNC2P02585 160 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 SHBGP04278 402 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 ITGAVP06756 1048 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 KRT7P08729 469 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 RALAP11233 206 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 TSHRP16473 764 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 ATP4AP20648 1035 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 KLRC2P26717 231 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 TMOD1P28289 359 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 ATICP31939 592 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 HNRNPH1P31943 449 aaKnown RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 KCNJ1P48048 391 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 ACOT2P49753 483 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 LIG3P49916 1009 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 ITGA8P53708 1063 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 HMGCS2P54868 508 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 NLRP11P59045 1033 aaKnown RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 NOP14P78316 857 aaKnown RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 NFX1Q12986 1120 aaKnown RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 XRCC4Q13426 336 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 CAPSQ13938 189 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 TAZQ16635 292 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 MAPK6Q16659 721 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 HADHQ16836 314 aaKnown RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 SKIDA1Q1XH10 827 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 TFDP3Q5H9I0 405 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 PPP1R15BQ5SWA1 713 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 RNF187Q5TA31 235 aaPredicted RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 ANGEL2Q5VTE6 544 aaKnown RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 WDR78Q5VTH9 848 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 ICE2Q659A1 982 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 HIBCHQ6NVY1 386 aaPredicted RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 AADACL2Q6P093 401 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 TMEM270Q6UE05 265 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 GSTA5Q7RTV2 222 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 SAMD7Q7Z3H4 446 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 PACS2Q86VP3 889 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 CCDC13Q8IYE1 715 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 THNSL1Q8IYQ7 743 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 DNAJC5GQ8N7S2 189 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 PROCA1Q8NCQ7 364 aaPredicted RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 DYDC1Q8WWB3 177 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 PRPF31Q8WWY3 499 aaKnown RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 CPA5Q8WXQ8 436 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 ARHGEF2Q92974 986 aaKnown RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 ZKSCAN4Q969J2 545 aaPredicted RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 TMEM143Q96AN5 459 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 CCDC114Q96M63 670 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 ACO2Q99798 780 aaKnown RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 SELENOSQ9BQE4 189 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 SH2D3AQ9BRG2 576 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 PI4K2AQ9BTU6 479 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 KIFC3Q9BVG8 833 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 TARS2Q9BW92 718 aaKnown RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 FRMD8Q9BZ67 464 aaPredicted RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 NIF3L1Q9GZT8 377 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 MTFR1LQ9H019 292 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 CCDC113Q9H0I3 377 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 CDC42EP4Q9H3Q1 356 aaKnown RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 ASB7Q9H672 318 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 AZI2Q9H6S1 392 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 VRTNQ9H8Y1 702 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 CYP3A43Q9HB55 503 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 ACP6Q9NPH0 428 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 AAASQ9NRG9 546 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 TOPORSQ9NS56 1045 aaPredicted RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 HAUS2Q9NVX0 235 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 SLC24A2Q9UI40 661 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 CPSF3Q9UKF6 684 aaKnown RBP4.12□□□□□ -1.75
ALYREF-201ENST00000504015 KIAA1257Q9ULG3 409 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 SHOC2Q9UQ13 582 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 PTPN22Q9Y2R2 807 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 CAPN7Q9Y6W3 813 aa4.12□□□□□ -1.75
ALYREF-201ENST00000504015 SIGLEC16A6NMB1 481 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 DCDC2CA8MYV0 355 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 ACKR2O00590 384 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 CXCL11O14625 94 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 DNALI1O14645 258 aaPredicted RBP4.11□□□□□ -1.75
ALYREF-201ENST00000504015 IRF6O14896 467 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 CHUKO15111 745 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 ALOX15BO15296 676 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 MAGEB2O15479 319 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 PRPF4O43172 522 aaKnown RBP eCLIP4.11□□□□□ -1.75
ALYREF-201ENST00000504015 ATMINO43313 823 aaPredicted RBP4.11□□□□□ -1.75
ALYREF-201ENST00000504015 FAM189A1O60320 539 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 HBP1O60381 514 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 SNX3O60493 162 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 USP2O75604 605 aaPredicted RBP4.11□□□□□ -1.75
ALYREF-201ENST00000504015 RASSF9O75901 435 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 ATP5HO75947 161 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 TOMM70O94826 608 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 SUN1O94901 812 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 STAU1O95793 577 aaKnown RBP4.11□□□□□ -1.75
ALYREF-201ENST00000504015 EGFRP00533 1210 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 HMGCRP04035 888 aa4.11□□□□□ -1.75
ALYREF-201ENST00000504015 VIMP08670 466 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms