RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ZNF560Q96MR9 790 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 TLR10Q9BXR5 811 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 BCO2Q9BYV7 579 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 SENP6Q9GZR1 1112 aaPredicted RBP8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 PLEKHA5Q9HAU0 1116 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 CISHQ9NSE2 258 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 SAGE1Q9NXZ1 904 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 DPP3Q9NY33 737 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 CNTN3Q9P232 1028 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 TUBGCP4Q9UGJ1 667 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 AGAP1Q9UPQ3 857 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 CNTN6Q9UQ52 1028 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 NOD1Q9Y239 953 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 HES2Q9Y543 173 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 CEP83Q9Y592 693 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 ALPK3Q96L96 1907 aa8.62□□□□□ -1.03
PDZRN3-212ENST00000498048 GREB1Q4ZG55 1949 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 TMEM110-MUSTN1A8MSY1 372 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 ZNF185O15231 689 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 TLR3O15455 904 aaKnown RBP8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 BUB1BO60566 1050 aaPredicted RBP8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 RPS6KA5O75582 802 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 CABYRO75952 493 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 STAU1O95793 577 aaKnown RBP8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 MYBL1P10243 752 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 CD19P15391 556 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 CXCR5P32302 372 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 HADHBP55084 474 aaKnown RBP8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 PRMT2P55345 433 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 GPC5P78333 572 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 RBP5P82980 135 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 C2orf54Q08AI8 447 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 MGAT3Q09327 533 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 MYO1EQ12965 1108 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 RPS6KA1Q15418 735 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 PTGISQ16647 500 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 WDR72Q3MJ13 1102 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 ZNF394Q53GI3 561 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 UBXN11Q5T124 520 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 SCARA3Q6AZY7 606 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 SMYD5Q6GMV2 418 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 ACAD10Q6JQN1 1059 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 MAMSTRQ6ZN01 415 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 MON1BQ7L1V2 547 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 RSRC2Q7L4I2 434 aaKnown RBP8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 HACE1Q8IYU2 909 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 SLC35G2Q8TBE7 412 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 RABGGTAQ92696 567 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 WNT8BQ93098 351 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 HPDLQ96IR7 371 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 FAXDC2Q96IV6 333 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 C11orf70Q9BRQ4 267 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 NUP85Q9BW27 656 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 VRTNQ9H8Y1 702 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 ARGLU1Q9NWB6 273 aaPredicted RBP8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 UVRAGQ9P2Y5 699 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 CNOT8Q9UFF9 292 aaKnown RBP8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 PARP2Q9UGN5 583 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 AMFRQ9UKV5 643 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 UBQLN1Q9UMX0 589 aaKnown RBP8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 NOC2LQ9Y3T9 749 aaKnown RBP8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 IPPQ9Y573 584 aa8.61□□□□□ -1.03
PDZRN3-212ENST00000498048 TTC3P53804 2025 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 MOXD2PA6NHM9 499 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 CES2O00748 559 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 KCNK3O14649 394 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 MED7O43513 233 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 MTA2O94776 668 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 LSM8O95777 96 aaKnown RBP8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 CYP1A1P04798 512 aaPredicted RBP8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 CYP1A2P05177 515 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 WEE2P0C1S8 567 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 UNGP13051 313 aaPredicted RBP8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 PRLRP16471 622 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 ATF7P17544 494 aaPredicted RBP8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 AKAP5P24588 427 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 SSTR3P32745 418 aaPredicted RBP8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 THPOP40225 353 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 PAFAH1B1P43034 410 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 ACLYP53396 1101 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 HTRA3P83110 453 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 PTPN11Q06124 597 aaPredicted RBP8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 PAK2Q13177 524 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 CAMK2BQ13554 666 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 ITGA7Q13683 1181 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 LIN9Q5TKA1 542 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 CCSAPQ6IQ19 270 aaPredicted RBP8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 NT5DC3Q86UY8 548 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 TTC39CQ8N584 583 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 C1orf131Q8NDD1 294 aaKnown RBP8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 CXorf38Q8TB03 319 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 COG1Q8WTW3 980 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 ZNF296Q8WUU4 475 aaPredicted RBP8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 GLT1D1Q96MS3 346 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 RPS6KC1Q96S38 1066 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 MMS19Q96T76 1030 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 SDCBP2Q9H190 292 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 CYP3A43Q9HB55 503 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 AVENQ9NQS1 362 aaPredicted RBP8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 EHD2Q9NZN4 543 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms