RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 GLUD2P49448 558 aa12.77□□□□□ -0.37
CUX1-210ENST00000497815 FXR1P51114 621 aaKnown RBP eCLIP12.77□□□□□ -0.37
CUX1-210ENST00000497815 UBE3AQ05086 875 aa12.77□□□□□ -0.37
CUX1-210ENST00000497815 CAMK1Q14012 370 aa12.77□□□□□ -0.37
CUX1-210ENST00000497815 FKBP15Q5T1M5 1219 aa12.77□□□□□ -0.37
CUX1-210ENST00000497815 WSCD1Q658N2 575 aa12.77□□□□□ -0.37
CUX1-210ENST00000497815 GBP6Q6ZN66 633 aa12.77□□□□□ -0.37
CUX1-210ENST00000497815 APTXQ7Z2E3 356 aaKnown RBP12.77□□□□□ -0.37
CUX1-210ENST00000497815 RNF168Q8IYW5 571 aaPredicted RBP12.77□□□□□ -0.37
CUX1-210ENST00000497815 EHBP1Q8NDI1 1231 aa12.77□□□□□ -0.37
CUX1-210ENST00000497815 APPL2Q8NEU8 664 aa12.77□□□□□ -0.37
CUX1-210ENST00000497815 TAF4BQ92750 862 aa12.77□□□□□ -0.37
CUX1-210ENST00000497815 TATDN2Q93075 761 aa12.77□□□□□ -0.37
CUX1-210ENST00000497815 APOBEC3GQ9HC16 384 aaKnown RBP12.77□□□□□ -0.37
CUX1-210ENST00000497815 GDAP2Q9NXN4 497 aa12.77□□□□□ -0.37
CUX1-210ENST00000497815 L1RE1Q9UN81 338 aa12.77□□□□□ -0.37
CUX1-210ENST00000497815 COQ4Q9Y3A0 265 aa12.77□□□□□ -0.37
CUX1-210ENST00000497815 LAMA3Q16787 3333 aa12.77□□□□□ -0.37
CUX1-210ENST00000497815 TRIOBPQ9H2D6 2365 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.76□□□□□ -0.37
CUX1-210ENST00000497815 LGALS16A8MUM7 142 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 SYN3O14994 580 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 STAU1O95793 577 aaKnown RBP12.76□□□□□ -0.37
CUX1-210ENST00000497815 P4HA1P13674 534 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 RPL17P18621 184 aaKnown RBP12.76□□□□□ -0.37
CUX1-210ENST00000497815 SLC9A1P19634 815 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 IGFBP4P22692 258 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 PAX3P23760 479 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 CDH8P55286 799 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 FANCCQ00597 558 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 PLCB2Q00722 1185 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 APBA1Q02410 837 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 UBXN1Q04323 297 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 YWHAHQ04917 246 aaPredicted RBP12.76□□□□□ -0.37
CUX1-210ENST00000497815 SMC1AQ14683 1233 aaKnown RBP12.76□□□□□ -0.37
CUX1-210ENST00000497815 PTPN21Q16825 1174 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 PTPROQ16827 1216 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 EXOC3L4Q17RC7 722 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 SOWAHAQ2M3V2 549 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 FILIP1LQ4L180 1135 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 VARS2Q5ST30 1063 aaKnown RBP12.76□□□□□ -0.37
CUX1-210ENST00000497815 KIAA0319Q5VV43 1072 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 METTL23Q86XA0 190 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 GLYCTKQ8IVS8 523 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 PDCL2Q8N4E4 241 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 PCMTD1Q96MG8 357 aaPredicted RBP12.76□□□□□ -0.37
CUX1-210ENST00000497815 NIF3L1Q9GZT8 377 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 LMAN2LQ9H0V9 348 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 SMYD3Q9H7B4 428 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 VRTNQ9H8Y1 702 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 MRPL17Q9NRX2 175 aaKnown RBP12.76□□□□□ -0.37
CUX1-210ENST00000497815 CHST7Q9NS84 486 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 STK39Q9UEW8 545 aa12.76□□□□□ -0.37
CUX1-210ENST00000497815 ARHGEF37A1IGU5 675 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 LRRC10BA6NIK2 292 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 HIDE1A8MVS5 230 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 PMM2O15305 246 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 HCRTO43612 131 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 WEE2P0C1S8 567 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 CTSAP10619 480 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 TYMPP19971 482 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 ASPAP45381 313 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 DSG1Q02413 1049 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 BMS1Q14692 1282 aaKnown RBP12.75□□□□□ -0.37
CUX1-210ENST00000497815 PTPN14Q15678 1187 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 PSMD5Q16401 504 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 CTXN3Q4LDR2 81 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 OVOS1Q6IE37 1185 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 RRAGAQ7L523 313 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 ARHGEF19Q8IW93 802 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 ADGRF2Q8IZF7 708 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 PPM1KQ8N3J5 372 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 DEFB123Q8N688 67 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 TOP6BLQ8N6T0 577 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 LMO3Q8TAP4 145 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 NAP1L5Q96NT1 182 aaPredicted RBP12.75□□□□□ -0.37
CUX1-210ENST00000497815 NT5C1BQ96P26 610 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 ARID3AQ99856 593 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 MRPL45Q9BRJ2 306 aaKnown RBP12.75□□□□□ -0.37
CUX1-210ENST00000497815 SDCBP2Q9H190 292 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 SNX25Q9H3E2 840 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 IFNKQ9P0W0 207 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 DSEQ9UL01 958 aa12.75□□□□□ -0.37
CUX1-210ENST00000497815 CHD9Q3L8U1 2897 aa12.74□□□□□ -0.37
CUX1-210ENST00000497815 GTPBP10A4D1E9 387 aaKnown RBP12.74□□□□□ -0.37
CUX1-210ENST00000497815 H7C4K7 107 aa12.74□□□□□ -0.37
CUX1-210ENST00000497815 FSCN2O14926 492 aa12.74□□□□□ -0.37
CUX1-210ENST00000497815 TEX33O43247 280 aa12.74□□□□□ -0.37
CUX1-210ENST00000497815 CD58P19256 250 aa12.74□□□□□ -0.37
CUX1-210ENST00000497815 ACAT1P24752 427 aaKnown RBP12.74□□□□□ -0.37
CUX1-210ENST00000497815 PON1P27169 355 aa12.74□□□□□ -0.37
CUX1-210ENST00000497815 KLK7P49862 253 aa12.74□□□□□ -0.37
CUX1-210ENST00000497815 CDR1P51861 262 aa12.74□□□□□ -0.37
CUX1-210ENST00000497815 ARPP19P56211 112 aa12.74□□□□□ -0.37
CUX1-210ENST00000497815 UBASH3AP57075 661 aa12.74□□□□□ -0.37
CUX1-210ENST00000497815 KCNMA1Q12791 1236 aa12.74□□□□□ -0.37
CUX1-210ENST00000497815 ADGRE1Q14246 886 aa12.74□□□□□ -0.37
CUX1-210ENST00000497815 SYCP1Q15431 976 aa12.74□□□□□ -0.37
CUX1-210ENST00000497815 ZNF280DQ6N043 979 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms