RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 TINF2Q9BSI4 451 aa7.38□□□□□ -1.23
USP39-219ENST00000496047 FUT8Q9BYC5 575 aa7.38□□□□□ -1.23
USP39-219ENST00000496047 GCOM2Q9BZD3 368 aaPredicted RBP7.38□□□□□ -1.23
USP39-219ENST00000496047 ZNF518BQ9C0D4 1074 aa7.38□□□□□ -1.23
USP39-219ENST00000496047 AP5M1Q9H0R1 490 aa7.38□□□□□ -1.23
USP39-219ENST00000496047 EPC1Q9H2F5 836 aa7.38□□□□□ -1.23
USP39-219ENST00000496047 FZD8Q9H461 694 aa7.38□□□□□ -1.23
USP39-219ENST00000496047 ASB7Q9H672 318 aa7.38□□□□□ -1.23
USP39-219ENST00000496047 TUT1Q9H6E5 874 aaKnown RBP7.38□□□□□ -1.23
USP39-219ENST00000496047 OSGEPQ9NPF4 335 aa7.38□□□□□ -1.23
USP39-219ENST00000496047 FAM114A2Q9NRY5 505 aa7.38□□□□□ -1.23
USP39-219ENST00000496047 RBM12Q9NTZ6 932 aaKnown RBP7.38□□□□□ -1.23
USP39-219ENST00000496047 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.38□□□□□ -1.23
USP39-219ENST00000496047 ZNF446Q9NWS9 450 aa7.38□□□□□ -1.23
USP39-219ENST00000496047 CPSF3Q9UKF6 684 aaKnown RBP7.38□□□□□ -1.23
USP39-219ENST00000496047 TTC7AQ9ULT0 858 aaPredicted RBP7.38□□□□□ -1.23
USP39-219ENST00000496047 STXBP5LQ9Y2K9 1186 aa7.38□□□□□ -1.23
USP39-219ENST00000496047 FAM187AA6NFU0 413 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 MYO1FO00160 1098 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 PDE2AO00408 941 aaPredicted RBP7.37□□□□□ -1.23
USP39-219ENST00000496047 MAP2K7O14733 419 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 NDC80O14777 642 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 B4GALT4O60513 344 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 ASS1P00966 412 aaKnown RBP7.37□□□□□ -1.23
USP39-219ENST00000496047 RPLP2P05387 115 aaKnown RBP7.37□□□□□ -1.23
USP39-219ENST00000496047 KRT19P08727 400 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 GNAT1P11488 350 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 ATF7P17544 494 aaPredicted RBP7.37□□□□□ -1.23
USP39-219ENST00000496047 PROZP22891 400 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 AXLP30530 894 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 CHRNA3P32297 505 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 RDXP35241 583 aaKnown RBP7.37□□□□□ -1.23
USP39-219ENST00000496047 ADCYAP1R1P41586 468 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 VEGFBP49765 207 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 HUNKP57058 714 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 RWDD2BP57060 319 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 SNX16P57768 344 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 LACTBP83111 547 aaPredicted RBP7.37□□□□□ -1.23
USP39-219ENST00000496047 GUCA2AQ02747 115 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 GUCY2DQ02846 1103 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 CENPCQ03188 943 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 MBTD1Q05BQ5 628 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 GRIK4Q16099 956 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 TAPT1Q6NXT6 567 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 MTHFD1LQ6UB35 978 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 CRELD2Q6UXH1 353 aaPredicted RBP7.37□□□□□ -1.23
USP39-219ENST00000496047 CCNI2Q6ZMN8 369 aaPredicted RBP7.37□□□□□ -1.23
USP39-219ENST00000496047 TMEM35BQ8NCS4 154 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 GRK7Q8WTQ7 553 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 AFG1LQ8WV93 481 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 KAT5Q92993 513 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 CAVIN3Q969G5 261 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 ARHGEF26Q96DR7 871 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 ZBTB45Q96K62 511 aaPredicted RBP7.37□□□□□ -1.23
USP39-219ENST00000496047 LRRC1Q9BTT6 524 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 PI4K2AQ9BTU6 479 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 FAM129AQ9BZQ8 928 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 MTMR12Q9C0I1 747 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 MCOLN1Q9GZU1 580 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 ZFYVE28Q9HCC9 887 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.37□□□□□ -1.23
USP39-219ENST00000496047 PDGFCQ9NRA1 345 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 HOMER3Q9NSC5 361 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 ANAPC7Q9UJX3 599 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 ITGA11Q9UKX5 1188 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 PCDHGC3Q9UN70 934 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 L1RE1Q9UN81 338 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 TELO2Q9Y4R8 837 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 ALG6Q9Y672 507 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 SCN10AQ9Y5Y9 1956 aa7.37□□□□□ -1.23
USP39-219ENST00000496047 NRCAMQ92823 1304 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 PASKQ96RG2 1323 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 A0A087WZ62 844 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 GOLGA6BA6NDN3 693 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 ZBTB42B2RXF5 422 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 GOLGA8KD6RF30 607 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 M0QZ92 97 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 PODXLO00592 558 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 PSTPIP1O43586 416 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 PHF2O75151 1096 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 VNN1O95497 513 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 FGGP02679 453 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 TFRCP02786 760 aaKnown RBP7.36□□□□□ -1.23
USP39-219ENST00000496047 CYP1A1P04798 512 aaPredicted RBP7.36□□□□□ -1.23
USP39-219ENST00000496047 ZNF286BP0CG31 522 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 CHRNB2P17787 502 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 COMTP21964 271 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 CTNNA1P35221 906 aaKnown RBP7.36□□□□□ -1.23
USP39-219ENST00000496047 ZNF157P51786 506 aaPredicted RBP7.36□□□□□ -1.23
USP39-219ENST00000496047 CDR1P51861 262 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 MYO1EQ12965 1108 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 TMEM132DQ14C87 1099 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 STILQ15468 1287 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 ZFYVE27Q5T4F4 411 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 CFAP58Q5T655 872 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 NAA35Q5VZE5 725 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 ALS2CLQ60I27 953 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 CEP128Q6ZU80 1094 aa7.36□□□□□ -1.23
USP39-219ENST00000496047 SND1Q7KZF4 910 aaKnown RBP eCLIP7.36□□□□□ -1.23
USP39-219ENST00000496047 TLK2Q86UE8 772 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms