RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 LIN9Q5TKA1 542 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 PLEKHA7Q6IQ23 1121 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 ARHGEF18Q6ZSZ5 1173 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.79□□□□□ -0.2
PTPN7-217ENST00000495688 IFT74Q96LB3 600 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 MAGEB18Q96M61 343 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 RBAKQ9NYW8 714 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-217ENST00000495688 IVNS1ABPQ9Y6Y0 642 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 ARID2Q68CP9 1835 aa13.79□□□□□ -0.2
PTPN7-217ENST00000495688 PECAM1P16284 738 aaPredicted RBP13.78□□□□□ -0.2
PTPN7-217ENST00000495688 BPIFB4P59827 614 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 ACTR2P61160 394 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 MYO1EQ12965 1108 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 MTM1Q13496 603 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 C4orf33Q8N1A6 199 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 ZCCHC9Q8N567 271 aaKnown RBP13.78□□□□□ -0.2
PTPN7-217ENST00000495688 MCPH1Q8NEM0 835 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 EXD1Q8NHP7 514 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 TARS2Q9BW92 718 aaKnown RBP13.78□□□□□ -0.2
PTPN7-217ENST00000495688 PITPNM3Q9BZ71 974 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 C10orf88Q9H8K7 445 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 ATP6V0A4Q9HBG4 840 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 RXFP1Q9HBX9 757 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 JPH1Q9HDC5 661 aaPredicted RBP13.78□□□□□ -0.2
PTPN7-217ENST00000495688 GRID1Q9ULK0 1009 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 GOLGA8SH3BPF8 625 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 GOLGA8MH3BSY2 632 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 LIASO43766 372 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 CCND2P30279 289 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 ARSEP51690 589 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 STAT4Q14765 748 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 MTFR1Q15390 333 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 PKN2Q16513 984 aaKnown RBP13.78□□□□□ -0.2
PTPN7-217ENST00000495688 ASAP3Q8TDY4 903 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 TEPSINQ96N21 525 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 MRPL47Q9HD33 250 aaKnown RBP13.78□□□□□ -0.2
PTPN7-217ENST00000495688 MAP3K20Q9NYL2 800 aaKnown RBP13.78□□□□□ -0.2
PTPN7-217ENST00000495688 SAE1Q9UBE0 346 aaPredicted RBP13.78□□□□□ -0.2
PTPN7-217ENST00000495688 FBXO40Q9UH90 709 aa13.78□□□□□ -0.2
PTPN7-217ENST00000495688 FAM47DPA6NHR8 397 aa13.77□□□□□ -0.2
PTPN7-217ENST00000495688 LRRIQ4A6NIV6 560 aa13.77□□□□□ -0.2
PTPN7-217ENST00000495688 TTLL13PA6NNM8 815 aa13.77□□□□□ -0.2
PTPN7-217ENST00000495688 ECM2O94769 699 aaPredicted RBP13.77□□□□□ -0.2
PTPN7-217ENST00000495688 NOP14P78316 857 aaKnown RBP13.77□□□□□ -0.2
PTPN7-217ENST00000495688 SP2Q02086 613 aa13.77□□□□□ -0.2
PTPN7-217ENST00000495688 OGDHQ02218 1023 aa13.77□□□□□ -0.2
PTPN7-217ENST00000495688 GAD2Q05329 585 aa13.77□□□□□ -0.2
PTPN7-217ENST00000495688 CXCL9Q07325 125 aa13.77□□□□□ -0.2
PTPN7-217ENST00000495688 GPS1Q13098 491 aa13.77□□□□□ -0.2
PTPN7-217ENST00000495688 SNRNP48Q6IEG0 339 aaKnown RBP13.77□□□□□ -0.2
PTPN7-217ENST00000495688 FEZF2Q8TBJ5 459 aa13.77□□□□□ -0.2
PTPN7-217ENST00000495688 CCDC77Q9BR77 488 aa13.77□□□□□ -0.2
PTPN7-217ENST00000495688 KIAA1586Q9HCI6 787 aa13.77□□□□□ -0.2
PTPN7-217ENST00000495688 KLHL14Q9P2G3 628 aa13.77□□□□□ -0.2
PTPN7-217ENST00000495688 MYH9P35579 1960 aaKnown RBP13.77□□□□□ -0.2
PTPN7-217ENST00000495688 CST3P01034 146 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-217ENST00000495688 PSAPP07602 524 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 ATP4AP20648 1035 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 POLGP54098 1239 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-217ENST00000495688 STRN3Q13033 797 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 RIPK1Q13546 671 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 EMC2Q15006 297 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 FAM182AQ5T1J6 154 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 TRABD2AQ86V40 505 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 PHF13Q86YI8 300 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-217ENST00000495688 TAB3Q8N5C8 712 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-217ENST00000495688 ZNF606Q8WXB4 792 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 GPRASP2Q96D09 838 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 MCEEQ96PE7 176 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 SLITRK1Q96PX8 696 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 SENP7Q9BQF6 1050 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 TMEM121Q9BTD3 319 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 SLC9A2Q9UBY0 812 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 ANP32DO95626 131 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 KRT1P04264 644 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 WDR72Q3MJ13 1102 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 TLDC1Q6P9B6 456 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 ABHD15Q6UXT9 468 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 ASRGL1Q7L266 308 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 RELL1Q8IUW5 271 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 RDM1Q8NG50 284 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 MSTO1Q9BUK6 570 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 MYOZ2Q9NPC6 264 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 ARHGEF3Q9NR81 526 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 PARVAQ9NVD7 372 aa13.77□□□□□ -0.21
PTPN7-217ENST00000495688 RGPD3A6NKT7 1758 aaPredicted RBP13.76□□□□□ -0.21
PTPN7-217ENST00000495688 RGPD4Q7Z3J3 1758 aa13.76□□□□□ -0.21
PTPN7-217ENST00000495688 A0A1W2PPM1 405 aa13.76□□□□□ -0.21
PTPN7-217ENST00000495688 DNALI1O14645 258 aaPredicted RBP13.76□□□□□ -0.21
PTPN7-217ENST00000495688 ASMTLO95671 621 aa13.76□□□□□ -0.21
PTPN7-217ENST00000495688 IFNB1P01574 187 aa13.76□□□□□ -0.21
PTPN7-217ENST00000495688 KRT15P19012 456 aa13.76□□□□□ -0.21
PTPN7-217ENST00000495688 GLRA2P23416 452 aa13.76□□□□□ -0.21
PTPN7-217ENST00000495688 RPA3P35244 121 aaPredicted RBP13.76□□□□□ -0.21
PTPN7-217ENST00000495688 PPP1R21Q6ZMI0 780 aa13.76□□□□□ -0.21
PTPN7-217ENST00000495688 ANKMY2Q8IV38 441 aa13.76□□□□□ -0.21
PTPN7-217ENST00000495688 ZBED8Q8IZ13 594 aa13.76□□□□□ -0.21
PTPN7-217ENST00000495688 ANKRD35Q8N283 1001 aa13.76□□□□□ -0.21
PTPN7-217ENST00000495688 TTLL6Q8N841 843 aa13.76□□□□□ -0.21
PTPN7-217ENST00000495688 GBP7Q8N8V2 638 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms