RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 SETDB1Q15047 1291 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 ARHGEF6Q15052 776 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 PTPROQ16827 1216 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 RNF43Q68DV7 783 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 PLEKHA7Q6IQ23 1121 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 CTU1Q7Z7A3 348 aaKnown RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 ZNF398Q8TD17 642 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 TAS1R2Q8TE23 839 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 BRI3BPQ8WY22 251 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 APBB2Q92870 758 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 CCDC127Q96BQ5 260 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 ALKBH8Q96BT7 664 aaKnown RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 DDX27Q96GQ7 796 aaKnown RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 AGBL1Q96MI9 1066 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 MPHOSPH6Q99547 160 aaKnown RBP12.18□□□□□ -0.46
RFC4-214ENST00000494047 CGRRF1Q99675 332 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 OSBPL8Q9BZF1 889 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 MIS12Q9H081 205 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 ADAM7Q9H2U9 754 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 RABEP2Q9H5N1 569 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 RXFP1Q9HBX9 757 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 ZFYVE28Q9HCC9 887 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 SLC9A2Q9UBY0 812 aa12.18□□□□□ -0.46
RFC4-214ENST00000494047 SMCHD1A6NHR9 2005 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 PHIPQ8WWQ0 1821 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 TMEM120BA0PK00 339 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 PRPF4O43172 522 aaKnown RBP eCLIP12.17□□□□□ -0.46
RFC4-214ENST00000494047 DCTN3O75935 186 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 WFS1O76024 890 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 ATP2A2P16615 1042 aaKnown RBP12.17□□□□□ -0.46
RFC4-214ENST00000494047 PTPRAP18433 802 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 MARCKSL1P49006 195 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 QPCTQ16769 361 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 ZPBP2Q6X784 338 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 FASTKD5Q7L8L6 764 aaKnown RBP12.17□□□□□ -0.46
RFC4-214ENST00000494047 SPATA21Q7Z572 469 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 ANKS1BQ7Z6G8 1248 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 ADAT2Q7Z6V5 191 aaKnown RBP12.17□□□□□ -0.46
RFC4-214ENST00000494047 ANKRD23Q86SG2 305 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 EXOC3L1Q86VI1 746 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 CCDC25Q86WR0 208 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 ABRAQ8N0Z2 381 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 NIPA2Q8N8Q9 360 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 DNERQ8NFT8 737 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 PLEKHO2Q8TD55 490 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 ZNF296Q8WUU4 475 aaPredicted RBP12.17□□□□□ -0.46
RFC4-214ENST00000494047 CNKSR2Q8WXI2 1034 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 ZBTB9Q96C00 473 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 FAM167AQ96KS9 214 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 PRMT1Q99873 361 aaKnown RBP12.17□□□□□ -0.46
RFC4-214ENST00000494047 PTPN18Q99952 460 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 JPH2Q9BR39 696 aaPredicted RBP12.17□□□□□ -0.46
RFC4-214ENST00000494047 TUBB6Q9BUF5 446 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 FRMD8Q9BZ67 464 aaPredicted RBP12.17□□□□□ -0.46
RFC4-214ENST00000494047 CCDC113Q9H0I3 377 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 PDLIM7Q9NR12 457 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 CYP26B1Q9NR63 512 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 ADAM22Q9P0K1 906 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 COL20A1Q9P218 1284 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 PTPN22Q9Y2R2 807 aa12.17□□□□□ -0.46
RFC4-214ENST00000494047 MYH9P35579 1960 aaKnown RBP12.16□□□□□ -0.46
RFC4-214ENST00000494047 MROH7Q68CQ1 1323 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 FAM47DPA6NHR8 397 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 SPAG6O75602 509 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 NR3C2P08235 984 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 TNNI1P19237 187 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 EIF2AK2P19525 551 aaKnown RBP12.16□□□□□ -0.46
RFC4-214ENST00000494047 GNA15P30679 374 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 GBP2P32456 591 aaPredicted RBP12.16□□□□□ -0.46
RFC4-214ENST00000494047 ICAM3P32942 547 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 ITGA8P53708 1063 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 POLGP54098 1239 aaPredicted RBP12.16□□□□□ -0.46
RFC4-214ENST00000494047 NOMO3P69849 1222 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 LACTBP83111 547 aaPredicted RBP12.16□□□□□ -0.46
RFC4-214ENST00000494047 DGKZQ13574 1117 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 SPARCL1Q14515 664 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 ACAP1Q15027 740 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 TAF1CQ15572 869 aaPredicted RBP12.16□□□□□ -0.46
RFC4-214ENST00000494047 CENPUQ71F23 418 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 ANO5Q75V66 913 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 MAEAQ7L5Y9 396 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 DHX37Q8IY37 1157 aaKnown RBP12.16□□□□□ -0.46
RFC4-214ENST00000494047 LRRC34Q8IZ02 419 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 TTC39CQ8N584 583 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 DEPTORQ8TB45 409 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 EPS8L3Q8TE67 593 aaKnown RBP12.16□□□□□ -0.46
RFC4-214ENST00000494047 FNIP1Q8TF40 1166 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 SLC7A3Q8WY07 619 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 SEMA4DQ92854 862 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 RSRC1Q96IZ7 334 aaKnown RBP12.16□□□□□ -0.46
RFC4-214ENST00000494047 PCDH9Q9HC56 1237 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 BATF3Q9NR55 127 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 RNF146Q9NTX7 359 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 FBXO28Q9NVF7 368 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 WDR35Q9P2L0 1181 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 AGO2Q9UKV8 859 aaKnown RBP12.16□□□□□ -0.46
RFC4-214ENST00000494047 STARD13Q9Y3M8 1113 aa12.16□□□□□ -0.46
RFC4-214ENST00000494047 DCDC2CA8MYV0 355 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 E7ENQ6 273 aa12.15□□□□□ -0.46
RFC4-214ENST00000494047 VWA5AO00534 786 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms