RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 EPCAMP16422 314 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 GNA11P29992 359 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 GNGT1P63211 74 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 IGBP1P78318 339 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 SHC2P98077 582 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 KRT76Q01546 638 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 NFX1Q12986 1120 aaKnown RBP11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 BIRC3Q13489 604 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 CUL1Q13616 776 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 GIT2Q14161 759 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 TMEM266Q2M3C6 531 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 LETM2Q2VYF4 491 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 MIIPQ5JXC2 388 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 ODR4Q5SWX8 454 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 CFAP58Q5T655 872 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 TMC5Q6UXY8 1006 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 LRRC43Q8N309 656 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 SLC44A3Q8N4M1 653 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 SEPT1Q8WYJ6 367 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 CALML4Q96GE6 196 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 CABS1Q96KC9 395 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 TSG101Q99816 390 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 SPZ1Q9BXG8 430 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 EPN3Q9H201 632 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 SMARCAD1Q9H4L7 1026 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 PARD6AQ9NPB6 346 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 ARHGEF3Q9NR81 526 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 EPS15L1Q9UBC2 864 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 CA14Q9ULX7 337 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 SMG5Q9UPR3 1016 aaKnown RBP11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 SIK3Q9Y2K2 1263 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 IGF2RP11717 2491 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 GOLGA6L10A6NI86 522 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 KLRF2D3W0D1 207 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 NDUFAB1O14561 156 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 ENC1O14682 589 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 ZBTB5O15062 677 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 CYTH3O43739 400 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 AKR1B10O60218 316 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 ATP9AO75110 1047 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 CXCL14O95715 111 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 PMLP29590 882 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 CDC25AP30304 524 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 PBX3P40426 434 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 CCT5P48643 541 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 MARSP56192 900 aaKnown RBP11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 GSCP56915 257 aaPredicted RBP11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 STARD6P59095 220 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 TRAF1Q13077 416 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 PPP2R5EQ16537 467 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 IL17AQ16552 155 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 HAUS3Q68CZ6 603 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 UNC13DQ70J99 1090 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 CROCCP2Q86T23 111 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 CABP7Q86V35 215 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 FMNL3Q8IVF7 1028 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 IQCKQ8N0W5 287 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 CCDC82Q8N4S0 544 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 MAGEC3Q8TD91 643 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 NETO1Q8TDF5 533 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 TRAPPC12Q8WVT3 735 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 LRRC45Q96CN5 670 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 CEP63Q96MT8 703 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 NAP1L4Q99733 375 aaKnown RBP11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 RHOBTB2Q9BYZ6 727 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 LACRTQ9GZZ8 138 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 ZBP1Q9H171 429 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 ASH1LQ9NR48 2969 aaKnown RBP11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 BARHL2Q9NY43 387 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 PKD2L1Q9P0L9 805 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 CEP72Q9P209 647 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 ANGPTL2Q9UKU9 493 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 NOC2LQ9Y3T9 749 aaKnown RBP11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 DAAM1Q9Y4D1 1078 aa11.4□□□□□ -0.58
PDLIM1-205ENST00000493949 GOLGA6L7A0A1B0GV03 622 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 PDE2AO00408 941 aaPredicted RBP11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 PES1O00541 588 aaKnown RBP11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 GPR182O15218 404 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 KIF1CO43896 1103 aaKnown RBP11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 TBC1D4O60343 1298 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 ABL1P00519 1130 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 SERPING1P05155 500 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 CTSAP10619 480 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 KCNA2P16389 499 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 CASP1P29466 404 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 HSPA9P38646 679 aaKnown RBP11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 MAGEA1P43355 309 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 POLGP54098 1239 aaPredicted RBP11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 C2orf54Q08AI8 447 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 IFFO1Q0D2I5 559 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 DSC3Q14574 896 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 PCNX4Q63HM2 1172 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 FOXR1Q6PIV2 292 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 OTUD6BQ8N6M0 293 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 GPR152Q8TDT2 470 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 RSAD2Q8WXG1 361 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 RNF25Q96BH1 459 aaPredicted RBP11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 PBKQ96KB5 322 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 CAPZA3Q96KX2 299 aa11.39□□□□□ -0.59
PDLIM1-205ENST00000493949 PCMTD1Q96MG8 357 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms