RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 MAMDC4Q6UXC1 1216 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 CABP7Q86V35 215 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 TEX2Q8IWB9 1127 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 SAMD3Q8N6K7 520 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 TRPV1Q8NER1 839 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 IL31RAQ8NI17 732 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 MORC4Q8TE76 937 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 KATNBL1Q9H079 304 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 ZMYND12Q9H0C1 365 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 CNTD2Q9H8S5 307 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 SH3GLB2Q9NR46 395 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 GPR27Q9NS67 375 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 TMEM260Q9NX78 707 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 SLC5A4Q9NY91 659 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 MAP3K20Q9NYL2 800 aaKnown RBP7.77□□□□□ -1.17
TPR-208ENST00000492973 KCNJ14Q9UNX9 436 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 FRMPD4Q14CM0 1322 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 RPTORQ8N122 1335 aa7.77□□□□□ -1.17
TPR-208ENST00000492973 CENPFP49454 3210 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.76□□□□□ -1.17
TPR-208ENST00000492973 BAG4O95429 457 aaKnown RBP7.76□□□□□ -1.17
TPR-208ENST00000492973 HMGCRP04035 888 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 BCL6P41182 706 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 NLRP5P59047 1200 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 DLG4P78352 724 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 CACNB2Q08289 660 aaPredicted RBP7.76□□□□□ -1.17
TPR-208ENST00000492973 RESTQ13127 1097 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 BMS1Q14692 1282 aaKnown RBP7.76□□□□□ -1.17
TPR-208ENST00000492973 ZNF124Q15973 351 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 PRAMEF19Q5SWL8 479 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 JAKMIP3Q5VZ66 844 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 MFSD14CQ5VZR4 134 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 RSPO2Q6UXX9 243 aaPredicted RBP7.76□□□□□ -1.17
TPR-208ENST00000492973 USP53Q70EK8 1073 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 ARMCX2Q7L311 632 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 TMC6Q7Z403 805 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 FERMT3Q86UX7 667 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 KRTAP19-1Q8IUB9 90 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 SCUBE1Q8IWY4 988 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 FAM177A1Q8N128 213 aaPredicted RBP7.76□□□□□ -1.17
TPR-208ENST00000492973 MSL3Q8N5Y2 521 aaKnown RBP7.76□□□□□ -1.17
TPR-208ENST00000492973 CCDC148Q8NFR7 591 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 DNERQ8NFT8 737 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 NSUN6Q8TEA1 469 aaKnown RBP7.76□□□□□ -1.17
TPR-208ENST00000492973 CCDC12Q8WUD4 166 aaPredicted RBP7.76□□□□□ -1.17
TPR-208ENST00000492973 KCNN1Q92952 543 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 CUL5Q93034 780 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 ZNF333Q96JL9 665 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 CHAMP1Q96JM3 812 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 PGBD1Q96JS3 809 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 RMDN3Q96TC7 470 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 PDCD2LQ9BRP1 358 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 PHF20Q9BVI0 1012 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 ZSCAN16Q9H4T2 348 aaPredicted RBP7.76□□□□□ -1.17
TPR-208ENST00000492973 GOLGA2P5Q9HBQ8 144 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 C6orf50Q9HD87 102 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 PXMP2Q9NR77 195 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 ADD3Q9UEY8 706 aaKnown RBP7.76□□□□□ -1.17
TPR-208ENST00000492973 HCFC2Q9Y5Z7 792 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 X6R8D5 127 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 SMCHD1A6NHR9 2005 aa7.76□□□□□ -1.17
TPR-208ENST00000492973 PLXNB2O15031 1838 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 COL11A1P12107 1806 aaPredicted RBP7.75□□□□□ -1.17
TPR-208ENST00000492973 ZNF236Q9UL36 1845 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 DOCK3Q8IZD9 2030 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 LOC102724159A0A0B4J2E5 919 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 ZC3H12DA2A288 527 aaKnown RBP7.75□□□□□ -1.17
TPR-208ENST00000492973 ASB14A6NK59 587 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 KIF28PB7ZC32 967 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 C22orf46C9J442 243 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 EDIL3O43854 480 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 MMP1P03956 469 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 NTRK1P04629 796 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 TMEM253P0C7T8 217 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 C1QTNF9P0C862 333 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 CYBAP13498 195 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 FPR2P25090 351 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 U2AF2P26368 475 aaKnown RBP eCLIP7.75□□□□□ -1.179e-7■■□□□ 11.6
TPR-208ENST00000492973 UBXN2AP68543 259 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 PWP2Q15269 919 aaKnown RBP7.75□□□□□ -1.17
TPR-208ENST00000492973 SLC9C1Q4G0N8 1177 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 FAM209AQ5JX71 171 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 ARHGEF16Q5VV41 709 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 FAM173BQ6P4H8 233 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 ZC3H14Q6PJT7 736 aaKnown RBP7.75□□□□□ -1.17
TPR-208ENST00000492973 USP33Q8TEY7 942 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 EXOC2Q96KP1 924 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 IWS1Q96ST2 819 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 SGPP1Q9BX95 441 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 ANO3Q9BYT9 981 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 GLT8D2Q9H1C3 349 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 CD320Q9NPF0 282 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 SIRT5Q9NXA8 310 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 PCDHA6Q9UN73 950 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 PCDHA8Q9Y5H6 950 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 PCDHA2Q9Y5H9 948 aa7.75□□□□□ -1.17
TPR-208ENST00000492973 TRBV23-1A0A0A0MS06 115 aa7.74□□□□□ -1.17
TPR-208ENST00000492973 BLACEA4D250 179 aa7.74□□□□□ -1.17
TPR-208ENST00000492973 BTBD18B2RXH4 712 aa7.74□□□□□ -1.17
TPR-208ENST00000492973 MSCO60682 206 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms