RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 DPH6Q7L8W6 267 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 CD302Q8IX05 232 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 ZNF397Q8NF99 534 aaPredicted RBP11.53□□□□□ -0.56
ATF3-209ENST00000492118 FAM193BQ96PV7 902 aaPredicted RBP11.53□□□□□ -0.56
ATF3-209ENST00000492118 LBHD1Q9BQE6 289 aaPredicted RBP11.53□□□□□ -0.56
ATF3-209ENST00000492118 IL23AQ9NPF7 189 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 ABHD10Q9NUJ1 306 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 TBC1D13Q9NVG8 400 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 CEP72Q9P209 647 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 ITGA11Q9UKX5 1188 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 COQ4Q9Y3A0 265 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 P4HA2O15460 535 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 B3GAT3O94766 335 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 ASS1P00966 412 aaKnown RBP11.53□□□□□ -0.56
ATF3-209ENST00000492118 FGBP02675 491 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 KCNJ6P48051 423 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 AP3M2P53677 418 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 MTF1Q14872 753 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 SGSM1Q2NKQ1 1148 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 TDRD12Q587J7 1177 aaKnown RBP11.53□□□□□ -0.56
ATF3-209ENST00000492118 ZNF667Q5HYK9 610 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 SPOUT1Q5T280 376 aaKnown RBP11.53□□□□□ -0.56
ATF3-209ENST00000492118 LRRC8AQ8IWT6 810 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 URGCPQ8TCY9 931 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 BAP1Q92560 729 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 CHP1Q99653 195 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 NUP58Q9BVL2 599 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 KCNF1Q9H3M0 494 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 IMPACTQ9P2X3 320 aa11.53□□□□□ -0.56
ATF3-209ENST00000492118 PUF60Q9UHX1 559 aaKnown RBP11.53□□□□□ -0.56
ATF3-209ENST00000492118 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.53□□□□□ -0.56
ATF3-209ENST00000492118 MYO9BQ13459 2157 aa11.52□□□□□ -0.56
ATF3-209ENST00000492118 PDCD11Q14690 1871 aaKnown RBP11.52□□□□□ -0.56
ATF3-209ENST00000492118 RALGAPA2Q2PPJ7 1873 aa11.52□□□□□ -0.56
ATF3-209ENST00000492118 SOWAHDA6NJG2 315 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 PODXLO00592 558 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 CYP26A1O43174 497 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 CD151P48509 253 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 ZBED6P86452 979 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 MYO1EQ12965 1108 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 NAB2Q15742 525 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 XKR4Q5GH76 650 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 TMEM270Q6UE05 265 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 DNAAF5Q86Y56 855 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 CNGA4Q8IV77 575 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 CASD1Q96PB1 797 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 PLCB1Q9NQ66 1216 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 HMGXB4Q9UGU5 601 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 EYSQ5T1H1 3165 aa11.52□□□□□ -0.57
ATF3-209ENST00000492118 F8VZ95 297 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 AMHP03971 560 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 RFC2P35250 354 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 ASPAP45381 313 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 BRCC3P46736 316 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 MFAP3P55082 362 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 PSMC1P62191 440 aaKnown RBP11.51□□□□□ -0.57
ATF3-209ENST00000492118 TNNC1P63316 161 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 PPIGQ13427 754 aaKnown RBP eCLIP11.51□□□□□ -0.57
ATF3-209ENST00000492118 CUL2Q13617 745 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 ZC3H12AQ5D1E8 599 aaKnown RBP11.51□□□□□ -0.57
ATF3-209ENST00000492118 SFMBT2Q5VUG0 894 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 PDXDC1Q6P996 788 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 C17orf53Q8N3J3 647 aaPredicted RBP11.51□□□□□ -0.57
ATF3-209ENST00000492118 OR8K1Q8NGG5 319 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 B3GALT6Q96L58 329 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 GPR88Q9GZN0 384 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 SDCBP2Q9H190 292 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 SEPT11Q9NVA2 429 aaKnown RBP11.51□□□□□ -0.57
ATF3-209ENST00000492118 SLC38A7Q9NVC3 462 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 PCDHB4Q9Y5E5 795 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 ABHD14A-ACY1A0A1B0GW23 586 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 KPNA7A9QM74 516 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 XPOTO43592 962 aaKnown RBP11.51□□□□□ -0.57
ATF3-209ENST00000492118 PDGFRBP09619 1106 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 GSDMDP57764 484 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 LILRA4P59901 499 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 GRIK3Q13003 919 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 TRIM14Q14142 442 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 TMEM240Q5SV17 173 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 WDR59Q6PJI9 974 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 NPAS4Q8IUM7 802 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 YME1L1Q96TA2 773 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 BAG1Q99933 345 aaPredicted RBP11.51□□□□□ -0.57
ATF3-209ENST00000492118 LPIN3Q9BQK8 851 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.51□□□□□ -0.57
ATF3-209ENST00000492118 NAA15Q9BXJ9 866 aaKnown RBP11.51□□□□□ -0.57
ATF3-209ENST00000492118 NIF3L1Q9GZT8 377 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 SUDS3Q9H7L9 328 aaPredicted RBP11.51□□□□□ -0.57
ATF3-209ENST00000492118 UBN1Q9NPG3 1134 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 DERAQ9Y315 318 aa11.51□□□□□ -0.57
ATF3-209ENST00000492118 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.51□□□□□ -0.574e-12■■■■□ 22.1
ATF3-209ENST00000492118 MYO7AQ13402 2215 aa11.5□□□□□ -0.57
ATF3-209ENST00000492118 TUSC3Q13454 348 aa11.5□□□□□ -0.57
ATF3-209ENST00000492118 ASIC2Q16515 512 aa11.5□□□□□ -0.57
ATF3-209ENST00000492118 UPP1Q16831 310 aa11.5□□□□□ -0.57
ATF3-209ENST00000492118 C9orf50Q5SZB4 431 aa11.5□□□□□ -0.57
ATF3-209ENST00000492118 SLC47A2Q86VL8 602 aa11.5□□□□□ -0.57
ATF3-209ENST00000492118 TMEM173Q86WV6 379 aaPredicted RBP11.5□□□□□ -0.57
ATF3-209ENST00000492118 MRPL45Q9BRJ2 306 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms