RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 AFF1P51825 1210 aaKnown RBP15.14■□□□□ 0.01
VPS26A-205ENST00000489656 CDR2Q01850 454 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 CLLU1OSQ5K130 101 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 TMEM270Q6UE05 265 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 NOP9Q86U38 636 aaKnown RBP15.14■□□□□ 0.01
VPS26A-205ENST00000489656 SLC47A2Q86VL8 602 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 GPIHBP1Q8IV16 184 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 C17orf53Q8N3J3 647 aaPredicted RBP15.14■□□□□ 0.01
VPS26A-205ENST00000489656 TXLNBQ8N3L3 684 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 RBBP8NLQ8NC74 664 aaPredicted RBP15.14■□□□□ 0.01
VPS26A-205ENST00000489656 RNF169Q8NCN4 708 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 DDX1Q92499 740 aaKnown RBP15.14■□□□□ 0.01
VPS26A-205ENST00000489656 VWCEQ96DN2 955 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 UROC1Q96N76 676 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 SDCBP2Q9H190 292 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 GOLGA2P5Q9HBQ8 144 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 LUC7LQ9NQ29 371 aaKnown RBP15.14■□□□□ 0.01
VPS26A-205ENST00000489656 KANSL3Q9P2N6 904 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 ADAMTS1Q9UHI8 967 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 KIAA1671Q9BY89 1806 aa15.14■□□□□ 0.01
VPS26A-205ENST00000489656 VWA8A3KMH1 1905 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 PTPRDP23468 1912 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 COL4A6Q14031 1691 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.13■□□□□ 0.01
VPS26A-205ENST00000489656 TRIM43BA6NCK2 446 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 DDX3XO00571 662 aaKnown RBP eCLIP15.13■□□□□ 0.013e-13■■□□□ 14
VPS26A-205ENST00000489656 PJA2O43164 708 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 HOXA2O43364 376 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 CILPO75339 1184 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 PFKMP08237 780 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 WEE2P0C1S8 567 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 CHRNB2P17787 502 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 EN2P19622 333 aaPredicted RBP15.13■□□□□ 0.01
VPS26A-205ENST00000489656 TNFAIP3P21580 790 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 VAV2P52735 878 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 LILRA4P59901 499 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 GFPT1Q06210 699 aaPredicted RBP15.13■□□□□ 0.01
VPS26A-205ENST00000489656 TUSC3Q13454 348 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 MFSD5Q6N075 450 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 SCARA5Q6ZMJ2 495 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 LNX1Q8TBB1 728 aaPredicted RBP15.13■□□□□ 0.01
VPS26A-205ENST00000489656 URGCPQ8TCY9 931 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 TRIM43Q96BQ3 446 aaPredicted RBP15.13■□□□□ 0.01
VPS26A-205ENST00000489656 DDX27Q96GQ7 796 aaKnown RBP15.13■□□□□ 0.01
VPS26A-205ENST00000489656 SMYD3Q9H7B4 428 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 NAGPAQ9UK23 515 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 BARX2Q9UMQ3 279 aaPredicted RBP15.13■□□□□ 0.01
VPS26A-205ENST00000489656 PCDHB7Q9Y5E2 793 aa15.13■□□□□ 0.01
VPS26A-205ENST00000489656 KPNA7A9QM74 516 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 TACC1O75410 805 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 PAEPP09466 180 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 AARSP49588 968 aaKnown RBP eCLIP15.12■□□□□ 0.01
VPS26A-205ENST00000489656 FMO1Q01740 532 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 CYP27A1Q02318 531 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 DSC1Q08554 894 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 IKBKEQ14164 716 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 UPP1Q16831 310 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 NOMO2Q5JPE7 1267 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 ALKBH5Q6P6C2 394 aaKnown RBP15.12■□□□□ 0.01
VPS26A-205ENST00000489656 DPH6Q7L8W6 267 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 NPAS4Q8IUM7 802 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 TOP6BLQ8N6T0 577 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 SLC20A1Q8WUM9 679 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.12■□□□□ 0.01
VPS26A-205ENST00000489656 TRMT1Q9NXH9 659 aaKnown RBP15.12■□□□□ 0.01
VPS26A-205ENST00000489656 INTUQ9ULD6 942 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 PCDHA13Q9Y5I0 950 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 SNX9Q9Y5X1 595 aa15.12■□□□□ 0.01
VPS26A-205ENST00000489656 ABHD14A-ACY1A0A1B0GW23 586 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 PODXLO00592 558 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 SPTLC1O15269 473 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 EFCAB14O75071 495 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 POMCP01189 267 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 GZMAP12544 262 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 RAG1P15918 1043 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 CD58P19256 250 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 GNA15P30679 374 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 ARHGAP25P42331 645 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 MAGEA1P43355 309 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 RAP1GAPP47736 663 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 CDH8P55286 799 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 TRIM72Q6ZMU5 477 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 NYAP1Q6ZVC0 841 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 DEFB128Q7Z7B8 93 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 KIAA1328Q86T90 577 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 UNC93AQ86WB7 457 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 GLYCTKQ8IVS8 523 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 RPUSD2Q8IZ73 545 aaKnown RBP15.11■□□□□ 0.01
VPS26A-205ENST00000489656 TMEM199Q8N511 208 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 SPATA18Q8TC71 538 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 WHAMMQ8TF30 809 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 TSGA10Q9BZW7 698 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 INPP5FQ9Y2H2 1132 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 NLRC5Q86WI3 1866 aa15.11■□□□□ 0.01
VPS26A-205ENST00000489656 TMEM189-UBE2V1I3L0A0 370 aa15.1■□□□□ 0.01
VPS26A-205ENST00000489656 TUBB4AP04350 444 aa15.1■□□□□ 0.01
VPS26A-205ENST00000489656 MMEP08473 750 aa15.1■□□□□ 0.01
VPS26A-205ENST00000489656 ITGB8P26012 769 aa15.1■□□□□ 0.01
VPS26A-205ENST00000489656 CLCNKBP51801 687 aa15.1■□□□□ 0.01
VPS26A-205ENST00000489656 RAD23BP54727 409 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms