RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 ADGRF2Q8IZF7 708 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 KLHL23Q8NBE8 558 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 APPL2Q8NEU8 664 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 SUSD3Q96L08 255 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 B3GALT6Q96L58 329 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 TGS1Q96RS0 853 aaKnown RBP13.2□□□□□ -0.3
TRAIP-209ENST00000488860 GPR62Q9BZJ7 368 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 GANQ9H2C0 597 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 VRTNQ9H8Y1 702 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 CERS4Q9HA82 394 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 NLRC4Q9NPP4 1024 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 DNAJC12Q9UKB3 198 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 PCDHB8Q9UN66 801 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 L1RE1Q9UN81 338 aa13.2□□□□□ -0.3
TRAIP-209ENST00000488860 TIMM13Q9Y5L4 95 aaPredicted RBP13.2□□□□□ -0.3
TRAIP-209ENST00000488860 RANBP2P49792 3224 aaKnown RBP13.19□□□□□ -0.3
TRAIP-209ENST00000488860 ITIH6Q6UXX5 1313 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 ARHGEF37A1IGU5 675 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 WEE2P0C1S8 567 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 TKTP29401 623 aaKnown RBP13.19□□□□□ -0.3
TRAIP-209ENST00000488860 BMPR1AP36894 532 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 PBX1P40424 430 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 AARSP49588 968 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRAIP-209ENST00000488860 MFAP3P55082 362 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 CDH8P55286 799 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 SMAD3P84022 425 aaKnown RBP13.19□□□□□ -0.3
TRAIP-209ENST00000488860 ELAVL2Q12926 359 aaKnown RBP13.19□□□□□ -0.3
TRAIP-209ENST00000488860 FAM171A1Q5VUB5 890 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 SPECC1LQ69YQ0 1117 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 METTL23Q86XA0 190 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 GPIHBP1Q8IV16 184 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 PDCL2Q8N4E4 241 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 TOP6BLQ8N6T0 577 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 TIFAQ96CG3 184 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 MRFAP1L1Q96HT8 127 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 SAMD11Q96NU1 681 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 HERC2P3Q9BVR0 1158 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 SDCBP2Q9H190 292 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 SLC28A3Q9HAS3 691 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 PLCB1Q9NQ66 1216 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 GDAP2Q9NXN4 497 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 PLXNA3P51805 1871 aa13.19□□□□□ -0.3
TRAIP-209ENST00000488860 M0QZQ0 153 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 C2CD2LO14523 706 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 NOL4O94818 638 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 KRT5P13647 590 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 UCHL3P15374 230 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 RFX1P22670 979 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 PAX3P23760 479 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 USP8P40818 1118 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 YWHAEP62258 255 aaKnown RBP13.18□□□□□ -0.3
TRAIP-209ENST00000488860 GCNT1Q02742 428 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 KRT17Q04695 432 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 SOWAHAQ2M3V2 549 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 WSCD1Q658N2 575 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 TAS1R1Q7RTX1 841 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 SPC24Q8NBT2 197 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 FBXO22Q8NEZ5 403 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 OR6B3Q8NGW1 331 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 CPLX3Q8WVH0 158 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 ARNTL2Q8WYA1 636 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 ANP32BQ92688 251 aaKnown RBP13.18□□□□□ -0.3
TRAIP-209ENST00000488860 FAM81BQ96LP2 452 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 KREMEN1Q96MU8 473 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 SPAG5Q96R06 1193 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 MRPL45Q9BRJ2 306 aaKnown RBP13.18□□□□□ -0.3
TRAIP-209ENST00000488860 VN1R3Q9BXE9 311 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 BCO2Q9BYV7 579 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 SNX25Q9H3E2 840 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 ALG13Q9NP73 1137 aaKnown RBP13.18□□□□□ -0.3
TRAIP-209ENST00000488860 CEP72Q9P209 647 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 DSEQ9UL01 958 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 PCDHB4Q9Y5E5 795 aa13.18□□□□□ -0.3
TRAIP-209ENST00000488860 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRAIP-209ENST00000488860 PTPRDP23468 1912 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 A0A1W2PPC1 479 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 SOD2P04179 222 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 URODP06132 367 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 TPM1P09493 284 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 PNMA6AP0CW24 399 aaPredicted RBP13.17□□□□□ -0.3
TRAIP-209ENST00000488860 CDC25BP30305 580 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 GLUD2P49448 558 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 ERVK-21P61565 698 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 YWHAHQ04917 246 aaPredicted RBP13.17□□□□□ -0.3
TRAIP-209ENST00000488860 ORC1Q13415 861 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 TRIM14Q14142 442 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 USP41Q3LFD5 358 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 ZNF394Q53GI3 561 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 OVOS1Q6IE37 1185 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 KIAA1841Q6NSI8 718 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 DPY19L2P1Q6NXN4 242 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.17□□□□□ -0.3
TRAIP-209ENST00000488860 ENOSF1Q7L5Y1 443 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 PPFIBP1Q86W92 1011 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 OSTM1Q86WC4 334 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 VPS52Q8N1B4 723 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 TMEM86AQ8N2M4 240 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 GDPD5Q8WTR4 605 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 KBTBD7Q8WVZ9 684 aa13.17□□□□□ -0.3
TRAIP-209ENST00000488860 TTPALQ9BTX7 342 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms