RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 DDX47Q9H0S4 455 aaKnown RBP14.09□□□□□ -0.15
CPNE1-225ENST00000483495 NR2E1Q9Y466 385 aa14.09□□□□□ -0.15
CPNE1-225ENST00000483495 MGAMO43451 1857 aa14.08□□□□□ -0.15
CPNE1-225ENST00000483495 GOLGA6L10A0A0M3HER8 536 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 DUSP11O75319 330 aaKnown RBP14.08□□□□□ -0.16
CPNE1-225ENST00000483495 PROSCO94903 275 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 CALB1P05937 261 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 MYL3P08590 195 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 PYGMP11217 842 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 P4HA1P13674 534 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 RWDD2BP57060 319 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 RBP5P82980 135 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 PURAQ00577 322 aaKnown RBP14.08□□□□□ -0.16
CPNE1-225ENST00000483495 BEX3Q00994 111 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 TMEM62Q0P6H9 643 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 PAK2Q13177 524 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 SEL1L2Q5TEA6 688 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 MAATS1Q7Z4T9 603 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 CCDC26Q8TAB7 109 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 WHAMMQ8TF30 809 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 CASKIN2Q8WXE0 1202 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 SEC14L1Q92503 715 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 OSMRQ99650 979 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 TRIM7Q9C029 511 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 SDCBP2Q9H190 292 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 LHX5Q9H2C1 402 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 PARVAQ9NVD7 372 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 DPP3Q9NY33 737 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 HPCAL4Q9UM19 191 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 KAT6AQ92794 2004 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 TCRBV5S1A1TA0A578 114 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 ZSCAN5CA6NGD5 496 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-225ENST00000483495 TREHO43280 583 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 KPNA6O60684 536 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 CILPO75339 1184 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 NPTXRO95502 500 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 POLR2BP30876 1174 aaKnown RBP14.08□□□□□ -0.16
CPNE1-225ENST00000483495 SSTR3P32745 418 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-225ENST00000483495 TNNT3P45378 269 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-225ENST00000483495 AARSP49588 968 aaKnown RBP eCLIP14.08□□□□□ -0.16
CPNE1-225ENST00000483495 CARSP49589 748 aaKnown RBP14.08□□□□□ -0.16
CPNE1-225ENST00000483495 RAD23BP54727 409 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 GPS2Q13227 327 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 ZNF394Q53GI3 561 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 C2CD6Q53TS8 623 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 LLGL2Q6P1M3 1020 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 NME8Q8N427 588 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 WDTC1Q8N5D0 677 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 TRPV1Q8NER1 839 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 DNAJB3Q8WWF6 145 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 HPDLQ96IR7 371 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 SNX27Q96L92 541 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 ACBD3Q9H3P7 528 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 SMYD3Q9H7B4 428 aa14.08□□□□□ -0.16
CPNE1-225ENST00000483495 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.08□□□□□ -0.16
CPNE1-225ENST00000483495 A0A0U1RQG5 324 aaPredicted RBP14.07□□□□□ -0.16
CPNE1-225ENST00000483495 C17orf102A2RUQ5 167 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 MED7O43513 233 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 GNAT1P11488 350 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 CYBAP13498 195 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 MAN1A1P33908 653 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 RAP1GAPP47736 663 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 LACTBP83111 547 aaPredicted RBP14.07□□□□□ -0.16
CPNE1-225ENST00000483495 INCA1Q0VD86 236 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 CUL1Q13616 776 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 SNX17Q15036 470 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 ZBTB6Q15916 424 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 AADACL2Q6P093 401 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 ALKAL1Q6UXT8 129 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 TMEM130Q8N3G9 435 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 C1orf131Q8NDD1 294 aaKnown RBP14.07□□□□□ -0.16
CPNE1-225ENST00000483495 PPP1R13LQ8WUF5 828 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 KIF12Q96FN5 646 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 EIF2AQ9BY44 585 aaKnown RBP14.07□□□□□ -0.16
CPNE1-225ENST00000483495 AMACRQ9UHK6 382 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 LCMT1Q9UIC8 334 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 AGAP1Q9UPQ3 857 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 GINS2Q9Y248 185 aa14.07□□□□□ -0.16
CPNE1-225ENST00000483495 ESYT3A0FGR9 886 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 H3BQF6 201 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 CDH8P55286 799 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 FCGRTP55899 365 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 GJA9P57773 515 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 NKX3-2P78367 333 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 CYP1B1Q16678 543 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 SND1Q7KZF4 910 aaKnown RBP eCLIP14.06□□□□□ -0.16
CPNE1-225ENST00000483495 SLC13A5Q86YT5 568 aaPredicted RBP14.06□□□□□ -0.16
CPNE1-225ENST00000483495 TTC39CQ8N584 583 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 SLC4A11Q8NBS3 891 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 FEZF2Q8TBJ5 459 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 TMEM40Q8WWA1 233 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 ZIC5Q96T25 663 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 PLVAPQ9BX97 442 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 ERVK-5Q9HDB9 667 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 ST7Q9NRC1 585 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 SNTG2Q9NY99 539 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 NFU1Q9UMS0 254 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 CEP83Q9Y592 693 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 TMEM191CA6NGB0 347 aa14.06□□□□□ -0.16
CPNE1-225ENST00000483495 OAS2P29728 719 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms