RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TPM4P67936 248 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 PTPN14Q15678 1187 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 PTPROQ16827 1216 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 SGSM1Q2NKQ1 1148 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 ZNF667Q5HYK9 610 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 GLYCTKQ8IVS8 523 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 GAS2L1Q99501 681 aaPredicted RBP19.15■□□□□ 0.66
CPNE1-224ENST00000483359 APOBEC3GQ9HC16 384 aaKnown RBP19.15■□□□□ 0.66
CPNE1-224ENST00000483359 MRPL17Q9NRX2 175 aaKnown RBP19.15■□□□□ 0.66
CPNE1-224ENST00000483359 CHST7Q9NS84 486 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 GCNT4Q9P109 453 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 L1RE1Q9UN81 338 aa19.15■□□□□ 0.66
CPNE1-224ENST00000483359 HUS1O60921 280 aa19.14■□□□□ 0.65
CPNE1-224ENST00000483359 RPL17P18621 184 aaKnown RBP19.14■□□□□ 0.65
CPNE1-224ENST00000483359 DSG1Q02413 1049 aa19.14■□□□□ 0.65
CPNE1-224ENST00000483359 CETN1Q12798 172 aa19.14■□□□□ 0.65
CPNE1-224ENST00000483359 SMC1AQ14683 1233 aaKnown RBP19.14■□□□□ 0.65
CPNE1-224ENST00000483359 VARS2Q5ST30 1063 aaKnown RBP19.14■□□□□ 0.65
CPNE1-224ENST00000483359 WSCD1Q658N2 575 aa19.14■□□□□ 0.65
CPNE1-224ENST00000483359 MICALL1Q8N3F8 863 aa19.14■□□□□ 0.65
CPNE1-224ENST00000483359 CCDC150Q8NCX0 1101 aa19.14■□□□□ 0.65
CPNE1-224ENST00000483359 MRPL38Q96DV4 380 aaKnown RBP19.14■□□□□ 0.65
CPNE1-224ENST00000483359 GUCD1Q96NT3 240 aa19.14■□□□□ 0.65
CPNE1-224ENST00000483359 CDX2Q99626 313 aaPredicted RBP19.14■□□□□ 0.65
CPNE1-224ENST00000483359 MYO7AQ13402 2215 aa19.14■□□□□ 0.65
CPNE1-224ENST00000483359 SYN3O14994 580 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 CXCL14O95715 111 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 TPM2P07951 284 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 RAP1GAPP47736 663 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 COPB1P53618 953 aaKnown RBP19.13■□□□□ 0.65
CPNE1-224ENST00000483359 YWHAHQ04917 246 aaPredicted RBP19.13■□□□□ 0.65
CPNE1-224ENST00000483359 RBM23Q86U06 439 aaKnown RBP19.13■□□□□ 0.65
CPNE1-224ENST00000483359 APPL2Q8NEU8 664 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 LMAN2LQ9H0V9 348 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 SMYD3Q9H7B4 428 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 GDAP2Q9NXN4 497 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 STK39Q9UEW8 545 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 LIMA1Q9UHB6 759 aaKnown RBP19.13■□□□□ 0.65
CPNE1-224ENST00000483359 COQ4Q9Y3A0 265 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 FSCN2O14926 492 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 PSMD5Q16401 504 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 SOWAHAQ2M3V2 549 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 WDR44Q5JSH3 913 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 KIAA0319Q5VV43 1072 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 ADGRD2Q7Z7M1 963 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 PDCL2Q8N4E4 241 aa19.13■□□□□ 0.65
CPNE1-224ENST00000483359 LNX1Q8TBB1 728 aaPredicted RBP19.13■□□□□ 0.65
CPNE1-224ENST00000483359 P4HA2O15460 535 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 STAU1O95793 577 aaKnown RBP19.12■□□□□ 0.65
CPNE1-224ENST00000483359 BMS1Q14692 1282 aaKnown RBP19.12■□□□□ 0.65
CPNE1-224ENST00000483359 OVOS1Q6IE37 1185 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 GAS2L3Q86XJ1 694 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 ADGRF2Q8IZF7 708 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 VRTNQ9H8Y1 702 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 NGRNQ9NPE2 291 aaKnown RBP19.12■□□□□ 0.65
CPNE1-224ENST00000483359 C2orf71A6NGG8 1288 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 PER2O15055 1255 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 HCRTO43612 131 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 ASPAP45381 313 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 CDR1P51861 262 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 CDH8P55286 799 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 APBA1Q02410 837 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 APTXQ7Z2E3 356 aaKnown RBP19.12■□□□□ 0.65
CPNE1-224ENST00000483359 MRPL43Q8N983 215 aaKnown RBP19.12■□□□□ 0.65
CPNE1-224ENST00000483359 PIK3R5Q8WYR1 880 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 TAF4BQ92750 862 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 TATDN2Q93075 761 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 ARID3AQ99856 593 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 INTS2Q9H0H0 1204 aaKnown RBP19.12■□□□□ 0.65
CPNE1-224ENST00000483359 MTMR10Q9NXD2 777 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 MTCH2Q9Y6C9 303 aa19.12■□□□□ 0.65
CPNE1-224ENST00000483359 SERPINC1P01008 464 aa19.11■□□□□ 0.65
CPNE1-224ENST00000483359 SLC9A1P19634 815 aa19.11■□□□□ 0.65
CPNE1-224ENST00000483359 PAX3P23760 479 aa19.11■□□□□ 0.65
CPNE1-224ENST00000483359 ARPP19P56211 112 aa19.11■□□□□ 0.65
CPNE1-224ENST00000483359 PTPN21Q16825 1174 aa19.11■□□□□ 0.65
CPNE1-224ENST00000483359 CTXN3Q4LDR2 81 aa19.11■□□□□ 0.65
CPNE1-224ENST00000483359 ZNF280DQ6N043 979 aa19.11■□□□□ 0.65
CPNE1-224ENST00000483359 GBP6Q6ZN66 633 aa19.11■□□□□ 0.65
CPNE1-224ENST00000483359 ANKS3Q6ZW76 656 aa19.11■□□□□ 0.65
CPNE1-224ENST00000483359 METTL23Q86XA0 190 aa19.11■□□□□ 0.65
CPNE1-224ENST00000483359 TOP6BLQ8N6T0 577 aa19.11■□□□□ 0.65
CPNE1-224ENST00000483359 LMO3Q8TAP4 145 aa19.11■□□□□ 0.65
CPNE1-224ENST00000483359 MRPL45Q9BRJ2 306 aaKnown RBP19.11■□□□□ 0.65
CPNE1-224ENST00000483359 NIF3L1Q9GZT8 377 aa19.11■□□□□ 0.65
CPNE1-224ENST00000483359 DSEQ9UL01 958 aa19.11■□□□□ 0.65
CPNE1-224ENST00000483359 PRRC2BQ5JSZ5 2229 aaKnown RBP19.11■□□□□ 0.65
CPNE1-224ENST00000483359 PMM2O15305 246 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 CNPP09543 421 aaKnown RBP19.1■□□□□ 0.65
CPNE1-224ENST00000483359 WEE2P0C1S8 567 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 P4HA1P13674 534 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 FOSL2P15408 326 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 TYMPP19971 482 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 EXOC3L4Q17RC7 722 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 RSPO2Q6UXX9 243 aaPredicted RBP19.1■□□□□ 0.65
CPNE1-224ENST00000483359 OSTM1Q86WC4 334 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 KBTBD7Q8WVZ9 684 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 SDCBP2Q9H190 292 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 CDY1Q9Y6F8 540 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 ARHGEF37A1IGU5 675 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms