RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 VAMP7P51809 220 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 BFSP1Q12934 665 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 TRPC3Q13507 836 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 LIN9Q5TKA1 542 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 TPGS2Q68CL5 300 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 ANKRD40Q6AI12 368 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 RSPO2Q6UXX9 243 aaPredicted RBP17.86■□□□□ 0.45
HMGN1-214ENST00000482733 ZNF461Q8TAF7 563 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 SPATA18Q8TC71 538 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 SUSD6Q92537 303 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 HPDLQ96IR7 371 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 NECTIN4Q96NY8 510 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 ZDHHC7Q9NXF8 308 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 GDAP2Q9NXN4 497 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 FBXW11Q9UKB1 542 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 MAFFQ9ULX9 164 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 USP15Q9Y4E8 981 aaPredicted RBP17.86■□□□□ 0.45
HMGN1-214ENST00000482733 TIMM13Q9Y5L4 95 aaPredicted RBP17.86■□□□□ 0.45
HMGN1-214ENST00000482733 PPP1R3GB7ZBB8 358 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 SLC16A3O15427 465 aaKnown RBP17.85■□□□□ 0.45
HMGN1-214ENST00000482733 HUS1O60921 280 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 PHACTR2O75167 634 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 IL9P15248 144 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 ANK1P16157 1881 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 MTHFRP42898 656 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 ROR1Q01973 937 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 UVSSAQ2YD98 709 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 ATAT1Q5SQI0 421 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 RARS2Q5T160 578 aaKnown RBP17.85■□□□□ 0.45
HMGN1-214ENST00000482733 C15orf39Q6ZRI6 1047 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 ZC3H3Q8IXZ2 948 aaKnown RBP17.85■□□□□ 0.45
HMGN1-214ENST00000482733 THEM5Q8N1Q8 247 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 TMEM86AQ8N2M4 240 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 TOP6BLQ8N6T0 577 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 PLEKHO2Q8TD55 490 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 ZNF516Q92618 1163 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 FAM84AQ96KN4 292 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 RIPOR3Q96MK2 946 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 RHOBTB2Q9BYZ6 727 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 PRKAG3Q9UGI9 489 aa17.85■□□□□ 0.45
HMGN1-214ENST00000482733 ABLIM3O94929 683 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 PAPLNO95428 1278 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 STAU1O95793 577 aaKnown RBP17.84■□□□□ 0.45
HMGN1-214ENST00000482733 MBD3O95983 291 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 SPATA31D3P0C874 917 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 CD44P16070 742 aaKnown RBP17.84■□□□□ 0.45
HMGN1-214ENST00000482733 ATICP31939 592 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 ELF1P32519 619 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 PMS1P54277 932 aaKnown RBP17.84■□□□□ 0.45
HMGN1-214ENST00000482733 MCCD1P59942 119 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-214ENST00000482733 BIRC3Q13489 604 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 KLHL10Q6JEL2 608 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 SPATA31D4Q6ZUB0 917 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 CCDC149Q6ZUS6 474 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 DPH6Q7L8W6 267 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 GPR149Q86SP6 731 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 C12orf76Q8N812 135 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-214ENST00000482733 ADAMTS19Q8TE59 1207 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 NELFBQ8WX92 580 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 SYAP1Q96A49 352 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-214ENST00000482733 APOL5Q9BWW9 433 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 SNX9Q9Y5X1 595 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 BRWD1Q9NSI6 2320 aa17.84■□□□□ 0.45
HMGN1-214ENST00000482733 WDR27A2RRH5 827 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 STX10O60499 249 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 ZMYND10O75800 440 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 CST3P01034 146 aaPredicted RBP17.83■□□□□ 0.44
HMGN1-214ENST00000482733 C4BPAP04003 597 aaKnown RBP17.83■□□□□ 0.44
HMGN1-214ENST00000482733 HNRNPA1P09651 372 aaKnown RBP eCLIP17.83■□□□□ 0.44
HMGN1-214ENST00000482733 CPB1P15086 417 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 ATF2P15336 505 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 HOXA9P31269 272 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 GTF2H1P32780 548 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 ARPP19P56211 112 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 DLG4P78352 724 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 PAK1Q13153 545 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 CBX2Q14781 532 aaPredicted RBP17.83■□□□□ 0.44
HMGN1-214ENST00000482733 WSCD1Q658N2 575 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 TMC5Q6UXY8 1006 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 MLKLQ8NB16 471 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 CEP63Q96MT8 703 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 AFF4Q9UHB7 1163 aaKnown RBP17.83■□□□□ 0.44
HMGN1-214ENST00000482733 A0A0C4DFX4 3053 aa17.83■□□□□ 0.44
HMGN1-214ENST00000482733 CCDC195A0A1B0GUA6 201 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 TRIM49BA6NDI0 452 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 C8AP07357 584 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 POU2F2P09086 479 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 FAM163BP0C2L3 166 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 LHX1P48742 406 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 GPR17Q13304 367 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 NCOA4Q13772 614 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 ZACNQ401N2 412 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 PPM1LQ5SGD2 360 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 TDRD10Q5VZ19 366 aaKnown RBP17.82■□□□□ 0.44
HMGN1-214ENST00000482733 TTI2Q6NXR4 508 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 PDCL2Q8N4E4 241 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 GPT2Q8TD30 523 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 UHRF1Q96T88 793 aaPredicted RBP17.82■□□□□ 0.44
HMGN1-214ENST00000482733 PRKD2Q9BZL6 878 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 VRTNQ9H8Y1 702 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms