RNA–Protein interactions for RNA: ENST00000482582.5

TRAIP-208, Transcript of TRAF interacting protein, humanhuman

TSL 5

Gene TRAIP, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-208ENST00000482582 CRACR2AQ9BSW2 395 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 NDST4Q9H3R1 872 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 APOBEC3GQ9HC16 384 aaKnown RBP12.67□□□□□ -0.38
TRAIP-208ENST00000482582 POLIQ9UNA4 740 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 NUB1Q9Y5A7 615 aa12.67□□□□□ -0.38
TRAIP-208ENST00000482582 TIMM13Q9Y5L4 95 aaPredicted RBP12.67□□□□□ -0.38
TRAIP-208ENST00000482582 CARNS1A5YM72 827 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 M0QZQ0 153 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 CYB561D2O14569 222 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 ASS1P00966 412 aaKnown RBP12.66□□□□□ -0.38
TRAIP-208ENST00000482582 SOD2P04179 222 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 IL9P15248 144 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 FGFR3P22607 806 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 IRS1P35568 1242 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 APBA1Q02410 837 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 KRT17Q04695 432 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 SV2CQ496J9 727 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 RTP2Q5QGT7 225 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 FAM171A1Q5VUB5 890 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 DSTYKQ6XUX3 929 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 LIMS2Q7Z4I7 341 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 TATDN2Q93075 761 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 ZNF560Q96MR9 790 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 HERC2P3Q9BVR0 1158 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 C1QTNF1Q9BXJ1 281 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 ZBP1Q9H171 429 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 CHST7Q9NS84 486 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 RAB20Q9NX57 234 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 GDAP2Q9NXN4 497 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 LZTS1Q9Y250 596 aa12.66□□□□□ -0.38
TRAIP-208ENST00000482582 SF3B1O75533 1304 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRAIP-208ENST00000482582 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.65□□□□□ -0.38
TRAIP-208ENST00000482582 FSCN2O14926 492 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 P4HA2O15460 535 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 N4BP1O75113 896 aaKnown RBP12.65□□□□□ -0.38
TRAIP-208ENST00000482582 STAU1O95793 577 aaKnown RBP12.65□□□□□ -0.38
TRAIP-208ENST00000482582 SLC9A1P19634 815 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 ATICP31939 592 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 PNPLA4P41247 253 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 KCNMA1Q12791 1236 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 LRMPQ12912 555 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 MYO1EQ12965 1108 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 SOWAHAQ2M3V2 549 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 SGSM1Q2NKQ1 1148 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 ZNF699Q32M78 642 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 WDR72Q3MJ13 1102 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 KIAA0319Q5VV43 1072 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 WSCD1Q658N2 575 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 DPY19L2P1Q6NXN4 242 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 PRSS55Q6UWB4 352 aaPredicted RBP12.65□□□□□ -0.38
TRAIP-208ENST00000482582 CEP57Q86XR8 500 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 EHBP1Q8NDI1 1231 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 NAP1L5Q96NT1 182 aaPredicted RBP12.65□□□□□ -0.38
TRAIP-208ENST00000482582 SDCBP2Q9H190 292 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 VRTNQ9H8Y1 702 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 NXF1Q9UBU9 619 aaKnown RBP12.65□□□□□ -0.38
TRAIP-208ENST00000482582 PCDHB8Q9UN66 801 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 L1RE1Q9UN81 338 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 COG5Q9UP83 839 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 SNX9Q9Y5X1 595 aa12.65□□□□□ -0.38
TRAIP-208ENST00000482582 GOLGA6L19H0YKK7 550 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 PES1O00541 588 aaKnown RBP12.64□□□□□ -0.39
TRAIP-208ENST00000482582 C2CD2LO14523 706 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 TEX33O43247 280 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 HCRTO43612 131 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 TRAPPC3O43617 180 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 LILRB3O75022 631 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 CTSAP10619 480 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 CDH8P55286 799 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 NOP14P78316 857 aaKnown RBP12.64□□□□□ -0.39
TRAIP-208ENST00000482582 FANCCQ00597 558 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 DSG1Q02413 1049 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 UBE3AQ05086 875 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 ELAVL2Q12926 359 aaKnown RBP12.64□□□□□ -0.39
TRAIP-208ENST00000482582 MRPL58Q14197 206 aaKnown RBP12.64□□□□□ -0.39
TRAIP-208ENST00000482582 PTPN21Q16825 1174 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 AAK1Q2M2I8 961 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 USP41Q3LFD5 358 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 ZNF667Q5HYK9 610 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 TMEM31Q5JXX7 168 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 RSPO2Q6UXX9 243 aaPredicted RBP12.64□□□□□ -0.39
TRAIP-208ENST00000482582 SCARA5Q6ZMJ2 495 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.64□□□□□ -0.39
TRAIP-208ENST00000482582 TMC7Q7Z402 723 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 OSTM1Q86WC4 334 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 PDCL2Q8N4E4 241 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 LNX1Q8TBB1 728 aaPredicted RBP12.64□□□□□ -0.39
TRAIP-208ENST00000482582 RIN2Q8WYP3 895 aaPredicted RBP12.64□□□□□ -0.39
TRAIP-208ENST00000482582 TAF4BQ92750 862 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 TTPALQ9BTX7 342 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 INTS2Q9H0H0 1204 aaKnown RBP12.64□□□□□ -0.39
TRAIP-208ENST00000482582 SMYD3Q9H7B4 428 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 UBE2ZQ9H832 354 aaPredicted RBP12.64□□□□□ -0.39
TRAIP-208ENST00000482582 TLR9Q9NR96 1032 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 PUF60Q9UHX1 559 aaKnown RBP12.64□□□□□ -0.39
TRAIP-208ENST00000482582 R3HCC1Q9Y3T6 440 aaKnown RBP12.64□□□□□ -0.39
TRAIP-208ENST00000482582 NME7Q9Y5B8 376 aa12.64□□□□□ -0.39
TRAIP-208ENST00000482582 PLXNA3P51805 1871 aa12.63□□□□□ -0.39
TRAIP-208ENST00000482582 C5orf42Q9H799 3197 aa12.63□□□□□ -0.39
TRAIP-208ENST00000482582 GTPBP10A4D1E9 387 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms