RNA–Protein interactions for RNA: ENST00000481070.1

KCNMA1-220, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 2 BASIC

Gene KCNMA1, Length 896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-220ENST00000481070 HOXD11P31277 338 aaPredicted RBP20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 CDH8P55286 799 aa20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 POLR2FP61218 127 aaKnown RBP20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 SMAD3P84022 425 aaKnown RBP20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 ARHGAP44Q17R89 818 aa20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 IQCEQ6IPM2 695 aa20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 SPC24Q8NBT2 197 aa20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 TAF4BQ92750 862 aa20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 MRFAP1L1Q96HT8 127 aa20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 SENP8Q96LD8 212 aa20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 PBX4Q9BYU1 374 aa20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 GANQ9H2C0 597 aa20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 NKX2-4Q9H2Z4 354 aa20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 SMYD3Q9H7B4 428 aa20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 NLRC4Q9NPP4 1024 aa20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 DNAJC12Q9UKB3 198 aa20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 ADAM28Q9UKQ2 775 aa20.62■□□□□ 0.89
KCNMA1-220ENST00000481070 CD58P19256 250 aa20.61■□□□□ 0.89
KCNMA1-220ENST00000481070 TRIM21P19474 475 aaKnown RBP20.61■□□□□ 0.89
KCNMA1-220ENST00000481070 RAPGEF1Q13905 1077 aa20.61■□□□□ 0.89
KCNMA1-220ENST00000481070 B3GALT6Q96L58 329 aa20.61■□□□□ 0.89
KCNMA1-220ENST00000481070 C17orf80Q9BSJ5 609 aa20.61■□□□□ 0.89
KCNMA1-220ENST00000481070 NIF3L1Q9GZT8 377 aa20.61■□□□□ 0.89
KCNMA1-220ENST00000481070 SDCBP2Q9H190 292 aa20.61■□□□□ 0.89
KCNMA1-220ENST00000481070 PLCB1Q9NQ66 1216 aa20.61■□□□□ 0.89
KCNMA1-220ENST00000481070 AAASQ9NRG9 546 aa20.61■□□□□ 0.89
KCNMA1-220ENST00000481070 PCDHA11Q9Y5I1 949 aa20.61■□□□□ 0.89
KCNMA1-220ENST00000481070 PIEZO1Q92508 2521 aa20.61■□□□□ 0.89
KCNMA1-220ENST00000481070 TMEM265A0A087WTH1 108 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 STAU1O95793 577 aaKnown RBP20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 LINC00271P0C7V0 271 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 UCHL3P15374 230 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 CTNNB1P35222 781 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 ASPAP45381 313 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 GOLGA8FQ08AF8 430 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 GOLGA8DPQ0D2H9 430 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 CUL2Q13617 745 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 SPECC1LQ69YQ0 1117 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 SLC39A11Q8N1S5 342 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 IGSF21Q96ID5 467 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 KREMEN1Q96MU8 473 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 GPR62Q9BZJ7 368 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 VRTNQ9H8Y1 702 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 CERS4Q9HA82 394 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 SPG21Q9NZD8 308 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 MSRAQ9UJ68 235 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 PCDHB12Q9Y5F1 795 aa20.6■□□□□ 0.89
KCNMA1-220ENST00000481070 TMEM189-UBE2V1I3L0A0 370 aa20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 HUS1O60921 280 aa20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 CSPG5O95196 566 aa20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 PNMA6AP0CW24 399 aaPredicted RBP20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 P4HA1P13674 534 aa20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 WSCD1Q658N2 575 aa20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 FUT10Q6P4F1 479 aa20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 TAS1R1Q7RTX1 841 aa20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 CACNA2D4Q7Z3S7 1137 aa20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 CEP57Q86XR8 500 aa20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 APPL2Q8NEU8 664 aa20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 CLP1Q92989 425 aaKnown RBP20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 MRPL45Q9BRJ2 306 aaKnown RBP20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 GDAP2Q9NXN4 497 aa20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 L1RE1Q9UN81 338 aa20.59■□□□□ 0.89
KCNMA1-220ENST00000481070 ITIH6Q6UXX5 1313 aa20.58■□□□□ 0.89
KCNMA1-220ENST00000481070 RNF225M0QZC1 329 aaPredicted RBP20.58■□□□□ 0.89
KCNMA1-220ENST00000481070 TKTP29401 623 aaKnown RBP20.58■□□□□ 0.89
KCNMA1-220ENST00000481070 USP8P40818 1118 aa20.58■□□□□ 0.89
KCNMA1-220ENST00000481070 MFAP3P55082 362 aa20.58■□□□□ 0.89
KCNMA1-220ENST00000481070 SOWAHAQ2M3V2 549 aa20.58■□□□□ 0.89
KCNMA1-220ENST00000481070 FAM171A1Q5VUB5 890 aa20.58■□□□□ 0.89
KCNMA1-220ENST00000481070 PDCL2Q8N4E4 241 aa20.58■□□□□ 0.89
KCNMA1-220ENST00000481070 KLHL23Q8NBE8 558 aa20.58■□□□□ 0.89
KCNMA1-220ENST00000481070 ANP32BQ92688 251 aaKnown RBP20.58■□□□□ 0.89
KCNMA1-220ENST00000481070 TMEM169Q96HH4 297 aa20.58■□□□□ 0.89
KCNMA1-220ENST00000481070 SUSD3Q96L08 255 aa20.58■□□□□ 0.89
KCNMA1-220ENST00000481070 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.58■□□□□ 0.89
KCNMA1-220ENST00000481070 HCRTO43612 131 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 TRAPPC3O43617 180 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 FGF18O76093 207 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 GYPCP04921 128 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 ODC1P11926 461 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 TBXAS1P24557 533 aaPredicted RBP20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 CDC25BP30305 580 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 CASP14P31944 242 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 BMPR1AP36894 532 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 AARSP49588 968 aaKnown RBP eCLIP20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 TAP1Q03518 808 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 ORC1Q13415 861 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 DRAP1Q14919 205 aaPredicted RBP20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 PPFIBP1Q86W92 1011 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 OSTM1Q86WC4 334 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 NLRC5Q86WI3 1866 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 NUP58Q9BVL2 599 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 VN1R3Q9BXE9 311 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 NAA15Q9BXJ9 866 aaKnown RBP20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 BCO2Q9BYV7 579 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 CEP72Q9P209 647 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 PCDHB4Q9Y5E5 795 aa20.57■□□□□ 0.88
KCNMA1-220ENST00000481070 SF3B1O75533 1304 aaKnown RBP eCLIP20.56■□□□□ 0.88
KCNMA1-220ENST00000481070 M0QZQ0 153 aa20.56■□□□□ 0.88
KCNMA1-220ENST00000481070 KRT5P13647 590 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms