RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 NOD2Q9HC29 1040 aa20.31■□□□□ 0.84
TNFRSF8-204ENST00000479933 NUB1Q9Y5A7 615 aa20.31■□□□□ 0.84
TNFRSF8-204ENST00000479933 UMODL1Q5DID0 1318 aa20.31■□□□□ 0.84
TNFRSF8-204ENST00000479933 SOWAHBA6NEL2 793 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 THAP12O43422 761 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 CAND2O75155 1236 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 TOM1L1O75674 476 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 SNUPNO95149 360 aaKnown RBP20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 AGTP01019 485 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 CETN2P41208 172 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 HIRAP54198 1017 aaPredicted RBP20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 ELF3P78545 371 aaPredicted RBP20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 PRKG1Q13976 671 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 MXD4Q14582 209 aaPredicted RBP20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 ZBTB41Q5SVQ8 909 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 KATNAL2Q8IYT4 538 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 MICAL1Q8TDZ2 1067 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 C1orf54Q8WWF1 131 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 SNF8Q96H20 258 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 C11orf70Q9BRQ4 267 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 ROPN1BQ9BZX4 212 aaPredicted RBP20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 SEMA4AQ9H3S1 761 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 ROPN1Q9HAT0 212 aaPredicted RBP20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 PARVAQ9NVD7 372 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 DICER1Q9UPY3 1922 aaKnown RBP20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 LRRC37A2A6NM11 1700 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 RGS16O15492 202 aaPredicted RBP20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 RIPK2O43353 540 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 SHBGP04278 402 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 GSTA1P08263 222 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 TCF7P36402 384 aaPredicted RBP20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 MAMLD1Q13495 774 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 NCAPG2Q86XI2 1143 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 ZBTB8OSQ8IWT0 167 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 CACNA2D3Q8IZS8 1091 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 OR5B17Q8NGF7 314 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 ATL2Q8NHH9 583 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 PRPF31Q8WWY3 499 aaKnown RBP20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 CCT6BQ92526 530 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 SPDL1Q96EA4 605 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 DCLK3Q9C098 648 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 C2orf40Q9H1Z8 148 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 PPANQ9NQ55 473 aaKnown RBP20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 C15orf41Q9Y2V0 281 aa20.3■□□□□ 0.84
TNFRSF8-204ENST00000479933 POLR2AP24928 1970 aaKnown RBP20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 LSM8O95777 96 aaKnown RBP20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 ZNF132P52740 706 aa20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 SPRED3Q2MJR0 410 aa20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 UBR7Q8N806 425 aa20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 EXD1Q8NHP7 514 aa20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 SEC16BQ96JE7 1060 aa20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 TRIM7Q9C029 511 aa20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 ASIC3Q9UHC3 531 aa20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 IP6K2Q9UHH9 426 aa20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 CORO1CQ9ULV4 474 aaPredicted RBP20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 ASS1P00966 412 aaKnown RBP20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 BZW1Q7L1Q6 419 aaKnown RBP20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 CCDC125Q86Z20 511 aa20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 BBOF1Q8ND07 529 aa20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 CCDC113Q9H0I3 377 aa20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 KIF9Q9HAQ2 790 aa20.29■□□□□ 0.84
TNFRSF8-204ENST00000479933 PAPPA2Q9BXP8 1791 aa20.28■□□□□ 0.84
TNFRSF8-204ENST00000479933 OGTO15294 1046 aa20.28■□□□□ 0.84
TNFRSF8-204ENST00000479933 MSCO60682 206 aa20.28■□□□□ 0.84
TNFRSF8-204ENST00000479933 SMNDC1O75940 238 aaKnown RBP eCLIP20.28■□□□□ 0.84
TNFRSF8-204ENST00000479933 SLC25A27O95847 323 aa20.28■□□□□ 0.84
TNFRSF8-204ENST00000479933 EDN1P05305 212 aa20.28■□□□□ 0.84
TNFRSF8-204ENST00000479933 CALB1P05937 261 aa20.28■□□□□ 0.84
TNFRSF8-204ENST00000479933 PECAM1P16284 738 aaPredicted RBP20.28■□□□□ 0.84
TNFRSF8-204ENST00000479933 CCNG2Q16589 344 aa20.28■□□□□ 0.84
TNFRSF8-204ENST00000479933 FEZF2Q8TBJ5 459 aa20.28■□□□□ 0.84
TNFRSF8-204ENST00000479933 NSMCE1Q8WV22 266 aa20.28■□□□□ 0.84
TNFRSF8-204ENST00000479933 TCHPQ9BT92 498 aa20.28■□□□□ 0.84
TNFRSF8-204ENST00000479933 EME2A4GXA9 379 aaPredicted RBP20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 DCDC2CA8MYV0 355 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 TMOD1P28289 359 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 SNX1Q13596 522 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 MAPK6Q16659 721 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 PASD1Q8IV76 773 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 ZNF606Q8WXB4 792 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 CHST7Q9NS84 486 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 TLR3O15455 904 aaKnown RBP20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 FAM189A1O60320 539 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 HARSP12081 509 aaKnown RBP20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 MMP13P45452 471 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 KLF1Q13351 362 aaPredicted RBP20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 DUOXA2Q1HG44 320 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 SGSM1Q2NKQ1 1148 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 ACCSLQ4AC99 568 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 CAPRIN2Q6IMN6 1127 aaKnown RBP20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 RHBDF2Q6PJF5 856 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 GADL1Q6ZQY3 521 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 PLPPR4Q7Z2D5 763 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 PHLDB2Q86SQ0 1253 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 RAPGEF5Q92565 580 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 ACO2Q99798 780 aaKnown RBP20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 SGIP1Q9BQI5 828 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 ZNF518BQ9C0D4 1074 aa20.27■□□□□ 0.84
TNFRSF8-204ENST00000479933 TLDC2A0PJX2 215 aa20.26■□□□□ 0.83
TNFRSF8-204ENST00000479933 RASGRF2O14827 1237 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms