RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ECM1Q16610 540 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 ANKRD20A4Q4UJ75 823 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 CBWD6Q4V339 395 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 ANKRD20A8PQ5CZ79 823 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 CBWD3Q5JTY5 395 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 CBWD5Q5RIA9 395 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 ANKRD20A2Q5SQ80 823 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 ANKRD20A1Q5TYW2 823 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 CDKL3Q8IVW4 592 aaPredicted RBP15.08■□□□□ 0
COL20A1-206ENST00000479501 SPIRE2Q8WWL2 714 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 BAP1Q92560 729 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 NT5C1AQ9BXI3 368 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 CST8O60676 142 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 CYFIP2Q96F07 1278 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 LRGUKQ96M69 825 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 ECT2Q9H8V3 914 aa15.08■□□□□ 0
COL20A1-206ENST00000479501 SH3BP5O60239 455 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 SPATA31C1P0DKV0 1188 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 HNRNPH3P31942 346 aaKnown RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 LAMC2Q13753 1193 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 THOC5Q13769 683 aaKnown RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 ERO1BQ86YB8 467 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 GPRC5AQ8NFJ5 357 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 XPO6Q96QU8 1125 aaKnown RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 HSD17B14Q9BPX1 270 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 MTMR12Q9C0I1 747 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 BATF3Q9NR55 127 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 PPARGC1AQ9UBK2 798 aaKnown RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 ZSCAN5CA6NGD5 496 aaPredicted RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 DNAJC8O75937 253 aaPredicted RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 ZFXP17010 805 aaPredicted RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 HNRNPH1P31943 449 aaKnown RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 FBXO25Q8TCJ0 367 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 PARD3BQ8TEW8 1205 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 TATDN2Q93075 761 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 GLIS2Q9BZE0 524 aaPredicted RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 ROPN1BQ9BZX4 212 aaPredicted RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 HSD3B7Q9H2F3 369 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 ROPN1Q9HAT0 212 aaPredicted RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 APOL1O14791 398 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 MGEA5O60502 916 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 ITGA4P13612 1032 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 LCP1P13796 627 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 PRKCIP41743 596 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 FOXR2Q6PJQ5 311 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 NUDCD1Q96RS6 583 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 SH3GL3Q99963 347 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 MTFR1LQ9H019 292 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 TRABDQ9H4I3 376 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 SUDS3Q9H7L9 328 aaPredicted RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 PRDM4Q9UKN5 801 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 PHF20L1A8MW92 1017 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 PDE2AO00408 941 aaPredicted RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 SHROOM1Q2M3G4 852 aaPredicted RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 EFHC2Q5JST6 749 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 HYIQ5T013 277 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 CRLF3Q8IUI8 442 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 CEP70Q8NHQ1 597 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 PRMT1Q99873 361 aaKnown RBP15.07■□□□□ 0
COL20A1-206ENST00000479501 ZNF446Q9NWS9 450 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 PCDHGC5Q9Y5F6 944 aa15.07■□□□□ 0
COL20A1-206ENST00000479501 TCP11X1B4DZS4 312 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 GRAP2O75791 330 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 PGK2P07205 417 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 RBP3P10745 1247 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 CLCN3P51790 818 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 TMEM62Q0P6H9 643 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 SMTNL2Q2TAL5 461 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 ARHGEF19Q8IW93 802 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 TRIML2Q8N7C3 387 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 DNERQ8NFT8 737 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 ATG4AQ8WYN0 398 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 CAVIN3Q969G5 261 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 HPDLQ96IR7 371 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 CGRRF1Q99675 332 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 EFHD1Q9BUP0 239 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 ADAM33Q9BZ11 813 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 ZFP69BQ9UJL9 534 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 CPSF3Q9UKF6 684 aaKnown RBP15.06■□□□□ 0
COL20A1-206ENST00000479501 RASSF10A6NK89 507 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 PFDN6O15212 129 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 DIAPH2O60879 1101 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 MAGEA4P43358 317 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 CYP4A22Q5TCH4 519 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 KCTD10Q9H3F6 313 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 TTC4O95801 387 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 NLRP11P59045 1033 aaKnown RBP15.06■□□□□ 0
COL20A1-206ENST00000479501 NME3Q13232 169 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 SPOPLQ6IQ16 392 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 ZNF662Q6ZS27 426 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 WDR75Q8IWA0 830 aaKnown RBP15.06■□□□□ 0
COL20A1-206ENST00000479501 THEM5Q8N1Q8 247 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 MID2Q9UJV3 735 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 DCTN4Q9UJW0 460 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 ASTN1O14525 1302 aa15.06■□□□□ 0
COL20A1-206ENST00000479501 ENO4A6NNW6 628 aa15.05■□□□□ 0
COL20A1-206ENST00000479501 TISP43B9A030 160 aa15.05■□□□□ 0
COL20A1-206ENST00000479501 KCNN4O15554 427 aa15.05■□□□□ 0
COL20A1-206ENST00000479501 ITGB3P05106 788 aa15.05■□□□□ 0
COL20A1-206ENST00000479501 OAZ1P54368 228 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms