RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 ASTN1O14525 1302 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 SPDYE16A6NNV3 312 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-205ENST00000475993 CLDN3O15551 220 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 ALDH2P05091 517 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 COL6A2P12110 1019 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 MAN1A1P33908 653 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 ARFIP2P53365 341 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 EMP3P54852 163 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 SLC12A3P55017 1021 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 ACTR3P61158 418 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 CDK16Q00536 496 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 CHRNDQ07001 517 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 CCDC62Q6P9F0 684 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 LVRNQ6Q4G3 990 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 B3GNT6Q6ZMB0 384 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 PHLDB2Q86SQ0 1253 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 ADGRG6Q86SQ4 1221 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 SLC7A5P1Q8MH63 180 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 OR6Y1Q8NGX8 325 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 CEP70Q8NHQ1 597 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 PSPC1Q8WXF1 523 aaKnown RBP11.13□□□□□ -0.63
ABCF1-205ENST00000475993 CASP10Q92851 521 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 NSUN4Q96CB9 384 aaKnown RBP11.13□□□□□ -0.63
ABCF1-205ENST00000475993 FAM161BQ96MY7 647 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 NDEL1Q9GZM8 345 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 GPAMQ9HCL2 828 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 FBXO6Q9NRD1 293 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-205ENST00000475993 CHST7Q9NS84 486 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 ATAD3AQ9NVI7 634 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 DDX18Q9NVP1 670 aaKnown RBP11.13□□□□□ -0.63
ABCF1-205ENST00000475993 A0A0G2JND7 137 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 AP1G1O43747 822 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 OXSR1O95747 527 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-205ENST00000475993 CDK4P11802 303 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 GYG1P46976 350 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 OVGP1Q12889 678 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 MED21Q13503 144 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 TRIP13Q15645 432 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-205ENST00000475993 CHRNA2Q15822 529 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 TMCO4Q5TGY1 634 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 RIPOR1Q6ZS17 1223 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 RFX8Q6ZV50 586 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 CPNE8Q86YQ8 564 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 DIS3LQ8TF46 1054 aaKnown RBP11.13□□□□□ -0.63
ABCF1-205ENST00000475993 MAML3Q96JK9 1138 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 PANX3Q96QZ0 392 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 ZHX3Q9H4I2 956 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 KCNK13Q9HB14 408 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 NEU2Q9Y3R4 380 aa11.13□□□□□ -0.63
ABCF1-205ENST00000475993 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.13□□□□□ -0.63
ABCF1-205ENST00000475993 POTECB2RU33 542 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 PDE5AO76074 875 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 RRM1P23921 792 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 GTF2H1P32780 548 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 TCF7P36402 384 aaPredicted RBP11.12□□□□□ -0.63
ABCF1-205ENST00000475993 ADCY8P40145 1251 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 MAGEA4P43358 317 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 CYLC2Q14093 348 aaPredicted RBP11.12□□□□□ -0.63
ABCF1-205ENST00000475993 UBE4AQ14139 1066 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 BMT2Q1RMZ1 405 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 RAPH1Q70E73 1250 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 LRRC6Q86X45 466 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 ANKK1Q8NFD2 765 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 GRK7Q8WTQ7 553 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 CFAP57Q96MR6 1250 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 PRICKLE1Q96MT3 831 aaPredicted RBP11.12□□□□□ -0.63
ABCF1-205ENST00000475993 SETDB2Q96T68 719 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 HNRNPABQ99729 332 aaKnown RBP11.12□□□□□ -0.63
ABCF1-205ENST00000475993 TRIM55Q9BYV6 548 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 SSU72Q9NP77 194 aaKnown RBP11.12□□□□□ -0.63
ABCF1-205ENST00000475993 TIMMDC1Q9NPL8 285 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 MKS1Q9NXB0 559 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 PPM1HQ9ULR3 514 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 MTO1Q9Y2Z2 717 aaKnown RBP11.12□□□□□ -0.63
ABCF1-205ENST00000475993 NUP98P52948 1817 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 SLIT2O94813 1529 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 SPOPO43791 374 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 UQCRBP14927 111 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 KRT15P19012 456 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 ENDOUP21128 410 aaKnown RBP11.12□□□□□ -0.63
ABCF1-205ENST00000475993 RXRGP48443 463 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 ASPHQ12797 758 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 SEPT7Q16181 437 aaKnown RBP11.12□□□□□ -0.63
ABCF1-205ENST00000475993 FXNQ16595 210 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 TMPRSS6Q8IU80 811 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 LARGE2Q8N3Y3 721 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 CCDC110Q8TBZ0 833 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 SLC20A1Q8WUM9 679 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 GAB3Q8WWW8 586 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 ATG4AQ8WYN0 398 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 GJA10Q969M2 543 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 TTC1Q99614 292 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 USP29Q9HBJ7 922 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 MCM9Q9NXL9 1143 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 PCDHB13Q9Y5F0 798 aa11.12□□□□□ -0.63
ABCF1-205ENST00000475993 POTEB3A0JP26 581 aa11.11□□□□□ -0.63
ABCF1-205ENST00000475993 STRNO43815 780 aa11.11□□□□□ -0.63
ABCF1-205ENST00000475993 USP1O94782 785 aa11.11□□□□□ -0.63
ABCF1-205ENST00000475993 KRT18P05783 430 aaKnown RBP11.11□□□□□ -0.63
ABCF1-205ENST00000475993 USP17L8P0C7I0 530 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms