RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 TECPR2O15040 1411 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 SPHKAPQ2M3C7 1700 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 LAMC1P11047 1609 aa3.41□□□□□ -1.86
UBXN4-206ENST00000470687 ARHGEF10O15013 1369 aa3.4□□□□□ -1.86
UBXN4-206ENST00000470687 PNPLA6Q8IY17 1366 aa3.4□□□□□ -1.86
UBXN4-206ENST00000470687 ASXL1Q8IXJ9 1541 aa3.4□□□□□ -1.86
UBXN4-206ENST00000470687 COL4A3Q01955 1670 aa3.4□□□□□ -1.86
UBXN4-206ENST00000470687 MYO5BQ9ULV0 1848 aa3.4□□□□□ -1.86
UBXN4-206ENST00000470687 MTSS1O43312 755 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 B3GALT2O43825 422 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 ITGA10O75578 1167 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 ALOX15P16050 662 aaPredicted RBP3.4□□□□□ -1.87
UBXN4-206ENST00000470687 PDCP20941 246 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 RECQLP46063 649 aaPredicted RBP3.4□□□□□ -1.87
UBXN4-206ENST00000470687 EPHB1P54762 984 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 ADKP55263 362 aaKnown RBP3.4□□□□□ -1.87
UBXN4-206ENST00000470687 BPIFB4P59827 614 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 FAPQ12884 760 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 MTM1Q13496 603 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 CCDC178Q5BJE1 867 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 FAM102BQ5T8I3 360 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 KCNV1Q6PIU1 500 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 NOL8Q76FK4 1167 aaKnown RBP3.4□□□□□ -1.87
UBXN4-206ENST00000470687 OVCH2Q7RTZ1 564 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 RD3Q7Z3Z2 195 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 XYLT1Q86Y38 959 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 UNC5CLQ8IV45 518 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 FMNL3Q8IVF7 1028 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 WDR48Q8TAF3 677 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 IFI44Q8TCB0 444 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 NSUN6Q8TEA1 469 aaKnown RBP3.4□□□□□ -1.87
UBXN4-206ENST00000470687 PTPRUQ92729 1446 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 RPGRQ92834 1020 aaKnown RBP3.4□□□□□ -1.87
UBXN4-206ENST00000470687 LPPQ93052 612 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 HPS3Q969F9 1004 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 HIST1H2AHQ96KK5 128 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 NT5C1BQ96P26 610 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 CAMKK2Q96RR4 588 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 HIST1H2AJQ99878 128 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 TEX101Q9BY14 249 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 ACE2Q9BYF1 805 aaPredicted RBP3.4□□□□□ -1.87
UBXN4-206ENST00000470687 ATP6V0A4Q9HBG4 840 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 CHST12Q9NRB3 414 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 CHPF2Q9P2E5 772 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 GABBR1Q9UBS5 961 aa3.4□□□□□ -1.87
UBXN4-206ENST00000470687 SBNO1A3KN83 1393 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 GPRASP1Q5JY77 1395 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 XRN1Q8IZH2 1706 aaKnown RBP3.39□□□□□ -1.87
UBXN4-206ENST00000470687 UBE2QL1A1L167 161 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 XPOTO43592 962 aaKnown RBP3.39□□□□□ -1.87
UBXN4-206ENST00000470687 USP14P54578 494 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 ZNF280AP59817 542 aaPredicted RBP3.39□□□□□ -1.87
UBXN4-206ENST00000470687 KIF23Q02241 960 aaPredicted RBP3.39□□□□□ -1.87
UBXN4-206ENST00000470687 MRPL49Q13405 166 aaKnown RBP3.39□□□□□ -1.87
UBXN4-206ENST00000470687 SNAPC2Q13487 334 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 SPIDRQ14159 915 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 CCDC181Q5TID7 509 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 NXNQ6DKJ4 435 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 FAM111BQ6SJ93 734 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 KRT28Q7Z3Y7 464 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 ZBTB46Q86UZ6 589 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 TCEAL8Q8IYN2 117 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 MAGEB6Q8N7X4 407 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 SLC35G2Q8TBE7 412 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 MDM1Q8TC05 714 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 RSAD2Q8WXG1 361 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 SLC7A6OSQ96CW6 309 aaPredicted RBP3.39□□□□□ -1.87
UBXN4-206ENST00000470687 PGBD4Q96DM1 585 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 HSPBAP1Q96EW2 488 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 LRIG1Q96JA1 1093 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 MNTQ99583 582 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 ACO2Q99798 780 aaKnown RBP3.39□□□□□ -1.87
UBXN4-206ENST00000470687 RBM12Q9NTZ6 932 aaKnown RBP3.39□□□□□ -1.87
UBXN4-206ENST00000470687 GPRC5DQ9NZD1 345 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 POGKQ9P215 609 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 ZNF180Q9UJW8 692 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 INTUQ9ULD6 942 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 SPEF1Q9Y4P9 236 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 ACTL7AQ9Y615 435 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 SPATA31A3Q5VYP0 1347 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 WASHC2AQ641Q2 1341 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 NEXMIFQ5QGS0 1516 aa3.39□□□□□ -1.87
UBXN4-206ENST00000470687 BRD4O60885 1362 aaPredicted RBP3.38□□□□□ -1.87
UBXN4-206ENST00000470687 SPATA31E1Q6ZUB1 1445 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 NHSL1Q5SYE7 1610 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 CXorf49A8MYA2 514 aaPredicted RBP3.38□□□□□ -1.87
UBXN4-206ENST00000470687 GOLGA6L6A8MZA4 724 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 PROB1E7EW31 1015 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 MARCH6O60337 910 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 PPFIA4O75335 1185 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 ZFPL1O95159 310 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 ALDH1A3P47895 512 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 MAP2K6P52564 334 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
UBXN4-206ENST00000470687 GRM3Q14832 879 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 NOMO1Q15155 1222 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 VPS72Q15906 364 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 HSP90AB2PQ58FF8 381 aa3.38□□□□□ -1.87
UBXN4-206ENST00000470687 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms