RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 TGM3Q08188 693 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 NFX1Q12986 1120 aaKnown RBP6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 HIC1Q14526 733 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 ZNF699Q32M78 642 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 DCAF6Q58WW2 860 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 SCYL2Q6P3W7 929 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 GALNT18Q6P9A2 607 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 LVRNQ6Q4G3 990 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 NEK10Q6ZWH5 1172 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 CROCCP3Q8IVE0 287 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 LCORLQ8N3X6 602 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 PCSK9Q8NBP7 692 aaKnown RBP6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 AGBL3Q8NEM8 1001 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 ZNF564Q8TBZ8 553 aaPredicted RBP6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 CENPTQ96BT3 561 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 EDC3Q96F86 508 aaKnown RBP6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 AGPAT1Q99943 283 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 SENP7Q9BQF6 1050 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 EMILIN2Q9BXX0 1053 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 FAM192AQ9GZU8 254 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 INTS2Q9H0H0 1204 aaKnown RBP6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 GIMAP4Q9NUV9 329 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 EVA1BQ9NVM1 165 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 SYBUQ9NX95 663 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 LMCD1Q9NZU5 365 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 RABGEF1Q9UJ41 708 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 SOX13Q9UN79 622 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 TLL2Q9Y6L7 1015 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 ABCA6Q8N139 1617 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 C3orf70A6NLC5 250 aaPredicted RBP6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 QSOX1O00391 747 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 GNRH1P01148 92 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 FGBP02675 491 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 PLS3P13797 630 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 CARSP49589 748 aaKnown RBP6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 CCT8P50990 548 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 AMPD2Q01433 879 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 SPP2Q13103 211 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 MEI1Q5TIA1 1274 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 TTC19Q6DKK2 380 aaPredicted RBP6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 GRAMD4Q6IC98 578 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 OR6B2Q6IFH4 312 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 C11orf63Q6NUN7 778 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 NEK5Q6P3R8 708 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 PADI6Q6TGC4 694 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 TBC1D1Q86TI0 1168 aaPredicted RBP6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 SLC22A9Q8IVM8 553 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 ST13P5Q8NFI4 369 aaPredicted RBP6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 TRPM4Q8TD43 1214 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 ANKS1AQ92625 1134 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 DLG3Q92796 817 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 IFT43Q96FT9 208 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 SLC39A8Q9C0K1 460 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 LGR6Q9HBX8 967 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 IGSF9BQ9UPX0 1349 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 ABCC6O95255 1503 aa6.43□□□□□ -1.38
CCDC144A-212ENST00000470068 TRIOBPQ9H2D6 2365 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 POTECB2RU33 542 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 TADA3O75528 432 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 RASSF9O75901 435 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 SNRPAP09012 282 aaKnown RBP6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 RPL3P39023 403 aaKnown RBP6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 GCLCP48506 637 aaPredicted RBP6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 RAB27AP51159 221 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 COASYQ13057 564 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 IFT88Q13099 833 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 BFSP2Q13515 415 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 CYLC2Q14093 348 aaPredicted RBP6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 RCN2Q14257 317 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 WASHC2DQ5SRD0 308 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 YTHDF3Q7Z739 585 aaKnown RBP6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 NLRP14Q86W24 1093 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 NAF1Q96HR8 494 aaKnown RBP6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 POP1Q99575 1024 aaKnown RBP6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 ZNF302Q9NR11 478 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 AAR2Q9Y312 384 aaKnown RBP6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 USP15Q9Y4E8 981 aaPredicted RBP6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 LRRIQ1Q96JM4 1722 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 CLTAP09496 248 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 ITGB6P18564 788 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 EPHB1P54762 984 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 GEMP55040 296 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 BCAR1P56945 870 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 TMPRSS15P98073 1019 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 MTMR1Q13613 665 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 CENPPQ6IPU0 288 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 KDM7AQ6ZMT4 941 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 ACTRT1Q8TDG2 376 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 CAVIN3Q969G5 261 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 PPWD1Q96BP3 646 aaKnown RBP6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 ACSF2Q96CM8 615 aaPredicted RBP6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 PHF20Q9BVI0 1012 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 ARMC7Q9H6L4 198 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 TDRD3Q9H7E2 651 aaKnown RBP6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 DBR1Q9UK59 544 aaKnown RBP6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 ZBTB21Q9ULJ3 1066 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 SYCE1LA8MT33 242 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 RASA4BC9J798 803 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 H3BMM5 538 aa6.42□□□□□ -1.38
CCDC144A-212ENST00000470068 NVLO15381 856 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms