RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 FRMD8P1Q9BZ68 369 aaPredicted RBP16.44■□□□□ 0.22
CHD1L-205ENST00000467213 PCDHB2Q9Y5E7 798 aa16.44■□□□□ 0.22
CHD1L-205ENST00000467213 HAUS5O94927 633 aa16.44■□□□□ 0.22
CHD1L-205ENST00000467213 NDUFB10O96000 172 aa16.44■□□□□ 0.22
CHD1L-205ENST00000467213 KRT15P19012 456 aa16.44■□□□□ 0.22
CHD1L-205ENST00000467213 GEMIN4P57678 1058 aaKnown RBP16.44■□□□□ 0.22
CHD1L-205ENST00000467213 GTF2IP78347 998 aa16.44■□□□□ 0.22
CHD1L-205ENST00000467213 TNIP1Q15025 636 aa16.44■□□□□ 0.22
CHD1L-205ENST00000467213 APOBEC3HQ6NTF7 200 aaKnown RBP16.44■□□□□ 0.22
CHD1L-205ENST00000467213 CENPUQ71F23 418 aa16.44■□□□□ 0.22
CHD1L-205ENST00000467213 MON1BQ7L1V2 547 aa16.44■□□□□ 0.22
CHD1L-205ENST00000467213 CCDC24Q8N4L8 307 aa16.44■□□□□ 0.22
CHD1L-205ENST00000467213 PAIP2Q9BPZ3 127 aaKnown RBP16.44■□□□□ 0.22
CHD1L-205ENST00000467213 TRIM55Q9BYV6 548 aa16.44■□□□□ 0.22
CHD1L-205ENST00000467213 RAB20Q9NX57 234 aa16.44■□□□□ 0.22
CHD1L-205ENST00000467213 CHORDC1Q9UHD1 332 aaPredicted RBP16.44■□□□□ 0.22
CHD1L-205ENST00000467213 KLF11O14901 512 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 SPAG7O75391 227 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 TJP3O95049 919 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 PHBP35232 272 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 TUBP50607 506 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 DLGAP5Q15398 846 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 CCDC6Q16204 474 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 RBM26Q5T8P6 1007 aaKnown RBP16.43■□□□□ 0.22
CHD1L-205ENST00000467213 LIN9Q5TKA1 542 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 ZNF449Q6P9G9 518 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 LVRNQ6Q4G3 990 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 SDCCAG8Q86SQ7 713 aaPredicted RBP16.43■□□□□ 0.22
CHD1L-205ENST00000467213 NKD2Q969F2 451 aaPredicted RBP16.43■□□□□ 0.22
CHD1L-205ENST00000467213 TEKT1Q969V4 418 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 AZIN2Q96A70 460 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 IL1RAPL1Q9NZN1 696 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 KANSL3Q9P2N6 904 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 SCINQ9Y6U3 715 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 ADAMTSL1Q8N6G6 1762 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 KLRG2A4D1S0 409 aaPredicted RBP16.43■□□□□ 0.22
CHD1L-205ENST00000467213 ZBTB39O15060 712 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 PLSCR1O15162 318 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 P4HBP07237 508 aaKnown RBP16.43■□□□□ 0.22
CHD1L-205ENST00000467213 DHRS4L1P0CG22 281 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 TRIP13Q15645 432 aaPredicted RBP16.43■□□□□ 0.22
CHD1L-205ENST00000467213 KLHL38Q2WGJ6 581 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 RNASEH2BQ5TBB1 312 aaKnown RBP16.43■□□□□ 0.22
CHD1L-205ENST00000467213 PRR5LQ6MZQ0 368 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 NSMFQ6X4W1 530 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 MTDHQ86UE4 582 aaKnown RBP16.43■□□□□ 0.22
CHD1L-205ENST00000467213 MZB1Q8WU39 189 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 SCG3Q8WXD2 468 aaKnown RBP16.43■□□□□ 0.22
CHD1L-205ENST00000467213 SPOCK2Q92563 424 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 ZNF577Q9BSK1 485 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 DNAJC17Q9NVM6 304 aaKnown RBP16.43■□□□□ 0.22
CHD1L-205ENST00000467213 DLGAP2Q9P1A6 1054 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 ITGAVP06756 1048 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 ADRB2P07550 413 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 POLR2MP0CAP2 368 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 CDK16Q00536 496 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 SNRNP35Q16560 246 aaKnown RBP16.43■□□□□ 0.22
CHD1L-205ENST00000467213 USH1GQ495M9 461 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 PLEKHA7Q6IQ23 1121 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 PHF13Q86YI8 300 aaPredicted RBP16.43■□□□□ 0.22
CHD1L-205ENST00000467213 ZDHHC15Q96MV8 337 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 PWWP2AQ96N64 755 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 PCIF1Q9H4Z3 704 aa16.43■□□□□ 0.22
CHD1L-205ENST00000467213 PLA2G6O60733 806 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 PDHA1P08559 390 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 PIM1P11309 404 aaPredicted RBP16.42■□□□□ 0.22
CHD1L-205ENST00000467213 FKBP1AP62942 108 aaKnown RBP16.42■□□□□ 0.22
CHD1L-205ENST00000467213 ACSBG2Q5FVE4 666 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 HAUS6Q7Z4H7 955 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 SP8Q8IXZ3 490 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 CERS5Q8N5B7 392 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 PTPRN2Q92932 1015 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 PCDH9Q9HC56 1237 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 ANGPTL2Q9UKU9 493 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 IPO5O00410 1097 aaKnown RBP16.42■□□□□ 0.22
CHD1L-205ENST00000467213 HOXA13P31271 388 aaPredicted RBP16.42■□□□□ 0.22
CHD1L-205ENST00000467213 RCN1Q15293 331 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 GNPTABQ3T906 1256 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 PLEKHG4Q58EX7 1191 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 CYP4F22Q6NT55 531 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 SLC51AQ86UW1 340 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 BANPQ8N9N5 519 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 ZNF184Q99676 751 aaPredicted RBP16.42■□□□□ 0.22
CHD1L-205ENST00000467213 EFR3BQ9Y2G0 817 aa16.42■□□□□ 0.22
CHD1L-205ENST00000467213 E7ESA3 106 aa16.41■□□□□ 0.22
CHD1L-205ENST00000467213 ADGRG6Q86SQ4 1221 aa16.41■□□□□ 0.22
CHD1L-205ENST00000467213 RNF217Q8TC41 542 aa16.41■□□□□ 0.22
CHD1L-205ENST00000467213 NRG4Q8WWG1 115 aa16.41■□□□□ 0.22
CHD1L-205ENST00000467213 MAK16Q9BXY0 300 aaKnown RBP16.41■□□□□ 0.22
CHD1L-205ENST00000467213 DMAP1Q9NPF5 467 aaPredicted RBP16.41■□□□□ 0.22
CHD1L-205ENST00000467213 RABGEF1Q9UJ41 708 aa16.41■□□□□ 0.22
CHD1L-205ENST00000467213 PRR12Q9ULL5 1215 aa16.41■□□□□ 0.22
CHD1L-205ENST00000467213 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.41■□□□□ 0.22
CHD1L-205ENST00000467213 GYG2O15488 501 aa16.41■□□□□ 0.22
CHD1L-205ENST00000467213 MAP3K7O43318 606 aa16.41■□□□□ 0.22
CHD1L-205ENST00000467213 ATP9AO75110 1047 aa16.41■□□□□ 0.22
CHD1L-205ENST00000467213 RARBP10826 455 aa16.41■□□□□ 0.22
CHD1L-205ENST00000467213 FGFR1P11362 822 aa16.41■□□□□ 0.22
CHD1L-205ENST00000467213 PSMC4P43686 418 aa16.41■□□□□ 0.22
CHD1L-205ENST00000467213 CLDN10P78369 228 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms