RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 TARSL2A2RTX5 802 aaKnown RBP10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 TMCO5BA8MYB1 307 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 PDE2AO00408 941 aaPredicted RBP10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 ZNF185O15231 689 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 NCK2O43639 380 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 BUB1BO60566 1050 aaPredicted RBP10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 NPTXRO95502 500 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 LSM8O95777 96 aaKnown RBP10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 TFRCP02786 760 aaKnown RBP10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 PAEPP09466 180 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 P4HA1P13674 534 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 ABCB4P21439 1286 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 GNA15P30679 374 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 GGCXP38435 758 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 PAFAH1B1P43034 410 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 COPS2P61201 443 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 RBP5P82980 135 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 ZBTB6Q15916 424 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 XKR4Q5GH76 650 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 ZNF667Q5HYK9 610 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 CCSAPQ6IQ19 270 aaPredicted RBP10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 ALKAL1Q6UXT8 129 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 PEX26Q7Z412 305 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 DAAM2Q86T65 1068 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 RSPH3Q86UC2 560 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 NT5DC3Q86UY8 548 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 DNAAF5Q86Y56 855 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 PHF13Q86YI8 300 aaPredicted RBP10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 MCOLN2Q8IZK6 566 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 PDCL2Q8N4E4 241 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 CAGE1Q8TC20 777 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 RUBCNQ92622 972 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 HES6Q96HZ4 224 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 SNX27Q96L92 541 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 CELF4Q9BZC1 486 aaKnown RBP10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 ZNF518BQ9C0D4 1074 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 OSGEPQ9NPF4 335 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 ACP6Q9NPH0 428 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 CISHQ9NSE2 258 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 ARGLU1Q9NWB6 273 aaPredicted RBP10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 CNTN3Q9P232 1028 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 AMFRQ9UKV5 643 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 COG5Q9UP83 839 aa10.18□□□□□ -0.78
APOBEC1-202ENST00000467171 MIF4GDA9UHW6 222 aaKnown RBP10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 CABYRO75952 493 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 HMGCRP04035 888 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 ZSCAN20P17040 1043 aaPredicted RBP10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 FGFR4P22455 802 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 CDH5P33151 784 aaPredicted RBP10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 YARSP54577 528 aaKnown RBP10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 NOMO3P69849 1222 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 MRPS6P82932 125 aaKnown RBP10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 ZNF200P98182 395 aaPredicted RBP10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 PTPN11Q06124 597 aaPredicted RBP10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 BRD3Q15059 726 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 NBPF20Q3BBV1 942 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 UBXN11Q5T124 520 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 CCDC181Q5TID7 509 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 SCARA3Q6AZY7 606 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 FBXO38Q6PIJ6 1188 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 CXCL17Q6UXB2 119 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 RASGEF1CQ8N431 466 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 PCSK9Q8NBP7 692 aaKnown RBP10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 NOA1Q8NC60 698 aaKnown RBP10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 SPATA4Q8NEY3 305 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 ACTRT1Q8TDG2 376 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 PXYLP1Q8TE99 480 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 TMEM40Q8WWA1 233 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 ZNF606Q8WXB4 792 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 ELMO3Q96BJ8 720 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 CAPZA3Q96KX2 299 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 SELENOOQ9BVL4 669 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 PARD6BQ9BYG5 372 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 ANKZF1Q9H8Y5 726 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 XPNPEP3Q9NQH7 507 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 RNF186Q9NXI6 227 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 CTTNBP2NLQ9P2B4 639 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 TTC7AQ9ULT0 858 aaPredicted RBP10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 PCDHGC3Q9UN70 934 aa10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.17□□□□□ -0.78
APOBEC1-202ENST00000467171 DDX3YO15523 660 aaKnown RBP10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 THAP12O43422 761 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 PGK1P00558 417 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 ITGB3P05106 788 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 KCNE1P15382 129 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 CYP3A5P20815 502 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 NSFP46459 744 aaKnown RBP10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 CAP1Q01518 475 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 TMEM62Q0P6H9 643 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 TRIM32Q13049 653 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 ARHGEF6Q15052 776 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 CLUL1Q15846 466 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 LIN9Q5TKA1 542 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 WDR93Q6P2C0 686 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 MON1BQ7L1V2 547 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 SERINC5Q86VE9 423 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 LRRC52Q8N7C0 313 aa10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 ZNF564Q8TBZ8 553 aaPredicted RBP10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 HNRNPLLQ8WVV9 542 aaKnown RBP10.16□□□□□ -0.78
APOBEC1-202ENST00000467171 ZNF653Q96CK0 615 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms