RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 PCDHB8Q9UN66 801 aa15.8■□□□□ 0.12
CXCR4-203ENST00000466288 NBEAQ8NFP9 2946 aa15.8■□□□□ 0.12
CXCR4-203ENST00000466288 LOC400499M0QZD8 3231 aa15.8■□□□□ 0.12
CXCR4-203ENST00000466288 BTBD18B2RXH4 712 aa15.79■□□□□ 0.12
CXCR4-203ENST00000466288 OAZ2O95190 189 aa15.79■□□□□ 0.12
CXCR4-203ENST00000466288 OR4Q2P0C623 313 aa15.79■□□□□ 0.12
CXCR4-203ENST00000466288 NOVA1P51513 510 aaKnown RBP15.79■□□□□ 0.12
CXCR4-203ENST00000466288 PLD1Q13393 1074 aa15.79■□□□□ 0.12
CXCR4-203ENST00000466288 ZNF568Q3ZCX4 644 aa15.79■□□□□ 0.12
CXCR4-203ENST00000466288 PLK5Q496M5 336 aa15.79■□□□□ 0.12
CXCR4-203ENST00000466288 KIFAP3Q92845 792 aa15.79■□□□□ 0.12
CXCR4-203ENST00000466288 TMEM209Q96SK2 561 aa15.79■□□□□ 0.12
CXCR4-203ENST00000466288 BRMS1Q9HCU9 246 aa15.79■□□□□ 0.12
CXCR4-203ENST00000466288 PDRG1Q9NUG6 133 aa15.79■□□□□ 0.12
CXCR4-203ENST00000466288 IGF2RP11717 2491 aa15.79■□□□□ 0.12
CXCR4-203ENST00000466288 M0QZQ0 153 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 DPYSL4O14531 572 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 ABLIM1O14639 778 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 PFKFB2O60825 505 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 PRAMEF12O95522 483 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 SPINK2P20155 84 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 PROZP22891 400 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 WEE1P30291 646 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 EPHB3P54753 998 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 PLCB2Q00722 1185 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 YWHAHQ04917 246 aaPredicted RBP15.78■□□□□ 0.12
CXCR4-203ENST00000466288 TMEM196Q5HYL7 178 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 TAS1R3Q7RTX0 852 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 DNAJB7Q7Z6W7 309 aaPredicted RBP15.78■□□□□ 0.12
CXCR4-203ENST00000466288 TMEM130Q8N3G9 435 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 BPIFB1Q8TDL5 484 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 WASF1Q92558 559 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 EDEM2Q9BV94 578 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 TARS2Q9BW92 718 aaKnown RBP15.78■□□□□ 0.12
CXCR4-203ENST00000466288 DUSP15Q9H1R2 295 aaPredicted RBP15.78■□□□□ 0.12
CXCR4-203ENST00000466288 ATXN3LQ9H3M9 355 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 POLR3BQ9NW08 1133 aaPredicted RBP15.78■□□□□ 0.12
CXCR4-203ENST00000466288 TPCN1Q9ULQ1 816 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 SLC8A2Q9UPR5 921 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 PDCD11Q14690 1871 aaKnown RBP15.78■□□□□ 0.12
CXCR4-203ENST00000466288 C4orf47A7E2U8 309 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 MCF2P10911 925 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 MARCKSP29966 332 aaPredicted RBP15.78■□□□□ 0.12
CXCR4-203ENST00000466288 ZNF252P-AS1Q0IIN9 211 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 FOXC1Q12948 553 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 GPR17Q13304 367 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 ECM1Q16610 540 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 ITPRIPL2Q3MIP1 535 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 GPR158Q5T848 1215 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 FSTL4Q6MZW2 842 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 CAMKK1Q8N5S9 505 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 PSMG2Q969U7 264 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 CHFRQ96EP1 664 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 OXCT2Q9BYC2 517 aaPredicted RBP15.78■□□□□ 0.12
CXCR4-203ENST00000466288 TUBGCP4Q9UGJ1 667 aa15.78■□□□□ 0.12
CXCR4-203ENST00000466288 TIMM13Q9Y5L4 95 aaPredicted RBP15.78■□□□□ 0.12
CXCR4-203ENST00000466288 AKAP13Q12802 2813 aa15.77■□□□□ 0.12
CXCR4-203ENST00000466288 ANKRD11Q6UB99 2663 aaPredicted RBP15.77■□□□□ 0.12
CXCR4-203ENST00000466288 DSPP15924 2871 aaKnown RBP15.77■□□□□ 0.12
CXCR4-203ENST00000466288 PHLPP2Q6ZVD8 1323 aa15.77■□□□□ 0.12
CXCR4-203ENST00000466288 FASNP49327 2511 aaKnown RBP15.77■□□□□ 0.12
CXCR4-203ENST00000466288 TRIP11Q15643 1979 aa15.77■□□□□ 0.12
CXCR4-203ENST00000466288 EPB41L2O43491 1005 aaKnown RBP15.77■□□□□ 0.11
CXCR4-203ENST00000466288 ATG13O75143 517 aa15.77■□□□□ 0.11
CXCR4-203ENST00000466288 TOP3BO95985 862 aaKnown RBP15.77■□□□□ 0.11
CXCR4-203ENST00000466288 GABRR2P28476 465 aa15.77■□□□□ 0.11
CXCR4-203ENST00000466288 ALDH1A3P47895 512 aa15.77■□□□□ 0.11
CXCR4-203ENST00000466288 NPTX2P47972 431 aa15.77■□□□□ 0.11
CXCR4-203ENST00000466288 SLC10A6Q3KNW5 377 aa15.77■□□□□ 0.11
CXCR4-203ENST00000466288 CENPPQ6IPU0 288 aa15.77■□□□□ 0.11
CXCR4-203ENST00000466288 DIS3L2Q8IYB7 885 aaKnown RBP15.77■□□□□ 0.11
CXCR4-203ENST00000466288 GATA6Q92908 595 aa15.77■□□□□ 0.11
CXCR4-203ENST00000466288 MRPL4Q9BYD3 311 aaKnown RBP15.77■□□□□ 0.11
CXCR4-203ENST00000466288 ADAM33Q9BZ11 813 aa15.77■□□□□ 0.11
CXCR4-203ENST00000466288 TMEM134Q9H6X4 195 aa15.77■□□□□ 0.11
CXCR4-203ENST00000466288 SLC27A5Q9Y2P5 690 aa15.77■□□□□ 0.11
CXCR4-203ENST00000466288 ASB3Q9Y575 518 aa15.77■□□□□ 0.11
CXCR4-203ENST00000466288 SMG1Q96Q15 3661 aaKnown RBP15.77■□□□□ 0.11
CXCR4-203ENST00000466288 TMEM8BA6NDV4 472 aa15.76■□□□□ 0.11
CXCR4-203ENST00000466288 MCM7P33993 719 aa15.76■□□□□ 0.11
CXCR4-203ENST00000466288 AARSP49588 968 aaKnown RBP eCLIP15.76■□□□□ 0.11
CXCR4-203ENST00000466288 PEX3P56589 373 aa15.76■□□□□ 0.11
CXCR4-203ENST00000466288 GRSF1Q12849 480 aaKnown RBP eCLIP15.76■□□□□ 0.11
CXCR4-203ENST00000466288 TTC9BQ8N6N2 239 aa15.76■□□□□ 0.11
CXCR4-203ENST00000466288 ATAD1Q8NBU5 361 aa15.76■□□□□ 0.11
CXCR4-203ENST00000466288 FAM83CQ9BQN1 747 aa15.76■□□□□ 0.11
CXCR4-203ENST00000466288 BHMT2Q9H2M3 363 aa15.76■□□□□ 0.11
CXCR4-203ENST00000466288 ARHGAP28Q9P2N2 729 aa15.76■□□□□ 0.11
CXCR4-203ENST00000466288 LNP1A1A4G5 178 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 BCLAF3A2AJT9 711 aaKnown RBP15.75■□□□□ 0.11
CXCR4-203ENST00000466288 MTMR11A4FU01 709 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 OTOL1A6NHN0 477 aaPredicted RBP15.75■□□□□ 0.11
CXCR4-203ENST00000466288 OR6C75A6NL08 312 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 SRRM3A6NNA2 597 aaPredicted RBP15.75■□□□□ 0.11
CXCR4-203ENST00000466288 CCDC169A6NNP5 214 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 TRDMT1O14717 391 aaKnown RBP15.75■□□□□ 0.11
CXCR4-203ENST00000466288 RNF40O75150 1001 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 SOAT2O75908 522 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 FGF19O95750 216 aa15.75■□□□□ 0.11
CXCR4-203ENST00000466288 CAVIN2O95810 425 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms