RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 ZNF480Q8WV37 535 aa6.29□□□□□ -1.4
CACNA1C-223ENST00000465278 HOXB13Q92826 284 aaPredicted RBP6.29□□□□□ -1.4
CACNA1C-223ENST00000465278 OR14A2Q96R54 314 aa6.29□□□□□ -1.4
CACNA1C-223ENST00000465278 NUP88Q99567 741 aaPredicted RBP6.29□□□□□ -1.4
CACNA1C-223ENST00000465278 PDCD2LQ9BRP1 358 aa6.29□□□□□ -1.4
CACNA1C-223ENST00000465278 EPC1Q9H2F5 836 aa6.29□□□□□ -1.4
CACNA1C-223ENST00000465278 SEC61A2Q9H9S3 476 aa6.29□□□□□ -1.4
CACNA1C-223ENST00000465278 IL23AQ9NPF7 189 aa6.29□□□□□ -1.4
CACNA1C-223ENST00000465278 NRXN2Q9P2S2 1712 aa6.29□□□□□ -1.4
CACNA1C-223ENST00000465278 TRPS1Q9UHF7 1281 aa6.29□□□□□ -1.4
CACNA1C-223ENST00000465278 HACL1Q9UJ83 578 aa6.29□□□□□ -1.4
CACNA1C-223ENST00000465278 USP47Q96K76 1375 aa6.29□□□□□ -1.4
CACNA1C-223ENST00000465278 KIF7Q2M1P5 1343 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 ANKRD26Q9UPS8 1709 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 SMG6Q86US8 1419 aaKnown RBP6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 OFD1O75665 1012 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 INHBBP09529 407 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 SREBF1P36956 1147 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 WNT3AP56704 352 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 JAG1P78504 1218 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 APBA1Q02410 837 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 GTF2H3Q13889 308 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 MST1LQ2TV78 715 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 FAM214AQ32MH5 1076 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 SLFN13Q68D06 897 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 CXorf57Q6NSI4 855 aaKnown RBP6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 LILRA6Q6PI73 481 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 PRR18Q8N4B5 295 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 MAGEB6Q8N7X4 407 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 HPS3Q969F9 1004 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 ARL8AQ96BM9 186 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 CDC5LQ99459 802 aaKnown RBP6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 TCF25Q9BQ70 676 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 LRFN3Q9BTN0 628 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 PLA2G12BQ9BX93 195 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 MEGF9Q9H1U4 602 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 BCO1Q9HAY6 547 aa6.28□□□□□ -1.4
CACNA1C-223ENST00000465278 ZNF646O15015 1829 aaPredicted RBP6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 WDFY4Q6ZS81 3184 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 FAM171A2A8MVW0 826 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 MTSS1O43312 755 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 HOXA3O43365 443 aaPredicted RBP6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 GASTP01350 101 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 GYPEP15421 78 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 DSC2Q02487 901 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 GRM7Q14831 915 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 LRIT3Q3SXY7 679 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 MINDY4Q4G0A6 757 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 ARHGAP29Q52LW3 1261 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 PRAMEF14Q5SWL7 426 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 FAM111BQ6SJ93 734 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 MIGA2Q7L4E1 593 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 ZGPATQ8N5A5 531 aaKnown RBP6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 MAFAQ8NHW3 353 aaPredicted RBP6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 CLPTM1LQ96KA5 538 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 SENP6Q9GZR1 1112 aaPredicted RBP6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 SLC12A5Q9H2X9 1139 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 EPG5Q9HCE0 2579 aa6.27□□□□□ -1.41
CACNA1C-223ENST00000465278 MYBBP1AQ9BQG0 1328 aaKnown RBP6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 SPTBN4Q9H254 2564 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 COL11A2P13942 1736 aaPredicted RBP6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 COL5A3P25940 1745 aaPredicted RBP6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 TJP1Q07157 1748 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 LRRC14BA6NHZ5 514 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 CTNND1O60716 968 aaKnown RBP6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 ENDOD1O94919 500 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 PLATP00750 562 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 GCP02774 474 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 AMY1AP04745 511 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 HOXA5P20719 270 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 FPR1P21462 350 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 CHRNA5P30532 468 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 CRHR1P34998 444 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 ATAT1Q5SQI0 421 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 MFSD14BQ5SR56 506 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 ZFYVE27Q5T4F4 411 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 NXNQ6DKJ4 435 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 TCTN3Q6NUS6 607 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 GLB1LQ6UWU2 654 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 RSPH3Q86UC2 560 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 XYLT1Q86Y38 959 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 DRC7Q8IY82 874 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 TRMT2AQ8IZ69 625 aaKnown RBP6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 SYNE4Q8N205 404 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 MVB12AQ96EY5 273 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 CEP95Q96GE4 821 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 MAP3K14Q99558 947 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 ENKD1Q9H0I2 346 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 TDP1Q9NUW8 608 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 AJAP1Q9UKB5 411 aaPredicted RBP6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 ACTL7AQ9Y615 435 aa6.26□□□□□ -1.41
CACNA1C-223ENST00000465278 TTC21AQ8NDW8 1320 aa6.25□□□□□ -1.41
CACNA1C-223ENST00000465278 CPSF1Q10570 1443 aaKnown RBP6.25□□□□□ -1.41
CACNA1C-223ENST00000465278 TRANK1O15050 2925 aa6.25□□□□□ -1.41
CACNA1C-223ENST00000465278 GOLGA6CA6NDK9 693 aa6.25□□□□□ -1.41
CACNA1C-223ENST00000465278 GOLGA6BA6NDN3 693 aa6.25□□□□□ -1.41
CACNA1C-223ENST00000465278 VSTM5A8MXK1 200 aa6.25□□□□□ -1.41
CACNA1C-223ENST00000465278 GPR42O15529 346 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms