RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 FAM200AQ8TCP9 573 aa12.34□□□□□ -0.43
PRAMEF35P-201ENST00000458709 LRRC3BQ96PB8 259 aa12.34□□□□□ -0.43
PRAMEF35P-201ENST00000458709 EDEM2Q9BV94 578 aa12.34□□□□□ -0.43
PRAMEF35P-201ENST00000458709 KIFC3Q9BVG8 833 aa12.34□□□□□ -0.43
PRAMEF35P-201ENST00000458709 C2orf40Q9H1Z8 148 aa12.34□□□□□ -0.43
PRAMEF35P-201ENST00000458709 ZDHHC9Q9Y397 364 aa12.34□□□□□ -0.43
PRAMEF35P-201ENST00000458709 IGF2RP11717 2491 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 H3BQV1 296 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 H7C4K7 107 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 SYN3O14994 580 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 TNK2Q07912 1038 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 CLEC17AQ6ZS10 378 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 TMC8Q8IU68 726 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 LEMD2Q8NC56 503 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 MCPH1Q8NEM0 835 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 E2F7Q96AV8 911 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 LRRC3Q9BY71 257 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 ADAM33Q9BZ11 813 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 TTC12Q9H892 705 aaPredicted RBP12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 AFF4Q9UHB7 1163 aaKnown RBP12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 PCDHA12Q9UN75 941 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 YIPF1Q9Y548 306 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 PCDHGA5Q9Y5G8 931 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 STK24Q9Y6E0 443 aa12.33□□□□□ -0.44
PRAMEF35P-201ENST00000458709 LAMA1P25391 3075 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 FASNP49327 2511 aaKnown RBP12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 SRRM3A6NNA2 597 aaPredicted RBP12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 CPB1P15086 417 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 ATP2B1P20020 1258 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 TOB1P50616 345 aaPredicted RBP12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 PKP1Q13835 747 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 NT5DC1Q5TFE4 455 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 ATF7IP2Q5U623 682 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 ZNF280DQ6N043 979 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 RNF19BQ6ZMZ0 732 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 ARID3BQ8IVW6 561 aaPredicted RBP12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 SYNPOQ8N3V7 929 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 DEPTORQ8TB45 409 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 GATA6Q92908 595 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 ZMAT2Q96NC0 199 aaKnown RBP12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 MKNK1Q9BUB5 465 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 GPR88Q9GZN0 384 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 DNAJC25Q9H1X3 360 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 VPS45Q9NRW7 570 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 POLR3BQ9NW08 1133 aaPredicted RBP12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 NUB1Q9Y5A7 615 aa12.32□□□□□ -0.44
PRAMEF35P-201ENST00000458709 CCDC163A0A0D9SF12 145 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 C4orf47A7E2U8 309 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 LAD1O00515 517 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 WNT7AO00755 349 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 VNN2O95498 520 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 PRAMEF12O95522 483 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 BMP15O95972 392 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 F13A1P00488 732 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 SPATA31C1P0DKV0 1188 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 NAMPTP43490 491 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 OSTNP61366 133 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 RING1Q06587 406 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 CALCRLQ16602 461 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 PLK5Q496M5 336 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 XKR4Q5GH76 650 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 SH3PXD2AQ5TCZ1 1133 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 C18orf25Q96B23 403 aaPredicted RBP12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 ZC3H10Q96K80 434 aaKnown RBP12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 SUSD3Q96L08 255 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 CRISPLD1Q9H336 500 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 POLD4Q9HCU8 107 aa12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.31□□□□□ -0.44
PRAMEF35P-201ENST00000458709 SPAG17Q6Q759 2223 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 TMEM8BA6NDV4 472 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 DPYSL4O14531 572 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 AKAP3O75969 853 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 OR4Q2P0C623 313 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 XRCC6P12956 609 aaKnown RBP eCLIP12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 MCM4P33991 863 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 GRM5P41594 1212 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 TXKP42681 527 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 NASPP49321 788 aaPredicted RBP12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 YARSP54577 528 aaKnown RBP12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 GUCY1B3Q02153 619 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 ARHGAP29Q52LW3 1261 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 ALKAL1Q6UXT8 129 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 GAREM2Q75VX8 874 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 HAUS6Q7Z4H7 955 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 TMEM130Q8N3G9 435 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 ZCCHC14Q8WYQ9 949 aaKnown RBP12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 DDX12PQ92771 950 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 PGLYRP2Q96PD5 576 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 HHIPQ96QV1 700 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 SCNM1Q9BWG6 230 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 DUSP15Q9H1R2 295 aaPredicted RBP12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 CDT1Q9H211 546 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 TOPORSQ9NS56 1045 aaPredicted RBP12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 SLC38A7Q9NVC3 462 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 LHX6Q9UPM6 363 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 ATP6V1DQ9Y5K8 247 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 TRIP11Q15643 1979 aa12.3□□□□□ -0.44
PRAMEF35P-201ENST00000458709 WDFY3Q8IZQ1 3526 aa12.29□□□□□ -0.44
PRAMEF35P-201ENST00000458709 LNP1A1A4G5 178 aa12.29□□□□□ -0.44
PRAMEF35P-201ENST00000458709 VPS37CA5D8V6 355 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms