RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 C2CD2LO14523 706 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 DHX15O43143 795 aaKnown RBP13.59□□□□□ -0.23
LINC00473-202ENST00000455853 DKC1O60832 514 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC00473-202ENST00000455853 TJP3O95049 919 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 CETPP11597 493 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 TSHRP16473 764 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 ATP6V1C1P21283 382 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 PTPN4P29074 926 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 PHBP35232 272 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 PEX3P56589 373 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
LINC00473-202ENST00000455853 DMP1Q13316 513 aaPredicted RBP13.59□□□□□ -0.23
LINC00473-202ENST00000455853 TRIP13Q15645 432 aaPredicted RBP13.59□□□□□ -0.23
LINC00473-202ENST00000455853 CCDC142Q17RM4 750 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 WDR44Q5JSH3 913 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 TMEM63BQ5T3F8 832 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 LRRC38Q5VT99 294 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 KIAA0825Q8IV33 1275 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC00473-202ENST00000455853 GPD1LQ8N335 351 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 DNAJC5GQ8N7S2 189 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 ANKLE1Q8NAG6 615 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 TAS1R2Q8TE23 839 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 C10orf82Q8WW14 230 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 C9orf72Q96LT7 481 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 NTPCRQ9BSD7 190 aaKnown RBP13.59□□□□□ -0.23
LINC00473-202ENST00000455853 FRMD8P1Q9BZ68 369 aaPredicted RBP13.59□□□□□ -0.23
LINC00473-202ENST00000455853 DCLRE1BQ9H816 532 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 AGO4Q9HCK5 861 aaKnown RBP13.59□□□□□ -0.23
LINC00473-202ENST00000455853 KCNH7Q9NS40 1196 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 ZFATQ9P243 1243 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 IP6K2Q9UHH9 426 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 CLEC11AQ9Y240 323 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 CHKBQ9Y259 395 aa13.59□□□□□ -0.23
LINC00473-202ENST00000455853 R3HDM2Q9Y2K5 976 aaKnown RBP13.59□□□□□ -0.23
LINC00473-202ENST00000455853 ALOX15BO15296 676 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 PEX11AO75192 247 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 SLURP2P0DP57 97 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 ACADSP16219 412 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 ITGB5P18084 799 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 KRT15P19012 456 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 CNGA1P29973 690 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 GCKP35557 465 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 CACNB3P54284 484 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 P3H1Q32P28 736 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 PCNX4Q63HM2 1172 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 CIAPIN1Q6FI81 312 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 PLEKHA7Q6IQ23 1121 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 CENPUQ71F23 418 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 SV2AQ7L0J3 742 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 LDHDQ86WU2 507 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 PHF13Q86YI8 300 aaPredicted RBP13.58□□□□□ -0.24
LINC00473-202ENST00000455853 TMEM161BQ8NDZ6 487 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 MICAL1Q8TDZ2 1067 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 UTP4Q969X6 686 aaKnown RBP13.58□□□□□ -0.24
LINC00473-202ENST00000455853 PAIP2Q9BPZ3 127 aaKnown RBP13.58□□□□□ -0.24
LINC00473-202ENST00000455853 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.58□□□□□ -0.24
LINC00473-202ENST00000455853 TMOD2Q9NZR1 351 aa13.58□□□□□ -0.24
LINC00473-202ENST00000455853 GOLGA8IPA6NC78 632 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 GOLGA8JA6NMD2 632 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 LIASO43766 372 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 TPBGLP0DKB5 382 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 TAL1P17542 331 aaPredicted RBP13.57□□□□□ -0.24
LINC00473-202ENST00000455853 GMPSP49915 693 aaPredicted RBP13.57□□□□□ -0.24
LINC00473-202ENST00000455853 RTP1P59025 263 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 UBXN2AP68543 259 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 KRT76Q01546 638 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 LBRQ14739 615 aaKnown RBP13.57□□□□□ -0.24
LINC00473-202ENST00000455853 TKFCQ3LXA3 575 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 SLC30A10Q6XR72 485 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 FAM47EQ6ZV65 393 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 MAEAQ7L5Y9 396 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 APBB1IPQ7Z5R6 666 aaPredicted RBP13.57□□□□□ -0.24
LINC00473-202ENST00000455853 ALLCQ8N6M5 410 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 FAM13CQ8NE31 585 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 CCDC127Q96BQ5 260 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 CSRNP1Q96S65 589 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 SPATS2LQ9NUQ6 558 aaKnown RBP13.57□□□□□ -0.24
LINC00473-202ENST00000455853 DNAJC17Q9NVM6 304 aaKnown RBP13.57□□□□□ -0.24
LINC00473-202ENST00000455853 TRIM33Q9UPN9 1127 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 CEP350Q5VT06 3117 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 ARID2Q68CP9 1835 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 WDR81Q562E7 1941 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 WDR64B1ANS9 1081 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 DDX39AO00148 427 aaKnown RBP13.57□□□□□ -0.24
LINC00473-202ENST00000455853 TM9SF1O15321 606 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 ICAM1P05362 532 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 FDX1P10109 184 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 CA4P22748 312 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 GCAP28676 217 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 VPS41P49754 854 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 RAD23BP54727 409 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 CLDN10P78369 228 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 TAP1Q03518 808 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 NFX1Q12986 1120 aaKnown RBP13.57□□□□□ -0.24
LINC00473-202ENST00000455853 DNAJC3Q13217 504 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 SGSM1Q2NKQ1 1148 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 BRDTQ58F21 947 aaPredicted RBP13.57□□□□□ -0.24
LINC00473-202ENST00000455853 EFHC2Q5JST6 749 aa13.57□□□□□ -0.24
LINC00473-202ENST00000455853 FAM102BQ5T8I3 360 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms