RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 SEMA4DQ92854 862 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 APBB2Q92870 758 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 COPS5Q92905 334 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 SAAL1Q96ER3 474 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 TMEM176AQ96HP8 235 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 ZFP91Q96JP5 570 aaPredicted RBP3.01□□□□□ -1.93
LINC00393-201ENST00000443621 TNIP3Q96KP6 325 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 HSFY1Q96LI6 401 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 NLRP4Q96MN2 994 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 TOX2Q96NM4 488 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 TBCBQ99426 244 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 FDXACB1Q9BRP7 624 aaPredicted RBP3.01□□□□□ -1.93
LINC00393-201ENST00000443621 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.01□□□□□ -1.93
LINC00393-201ENST00000443621 CARD6Q9BX69 1037 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 NT5C1AQ9BXI3 368 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 IRX2Q9BZI1 471 aaPredicted RBP3.01□□□□□ -1.93
LINC00393-201ENST00000443621 RAB17Q9H0T7 212 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 RETREG1Q9H6L5 497 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 LRRC19Q9H756 370 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 ELAC1Q9H777 363 aaKnown RBP3.01□□□□□ -1.93
LINC00393-201ENST00000443621 MINDY3Q9H8M7 445 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 PDE11AQ9HCR9 933 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 PNPLA8Q9NP80 782 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 MED4Q9NPJ6 270 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 CISHQ9NSE2 258 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 ASNSD1Q9NWL6 643 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 DPP3Q9NY33 737 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 DDX56Q9NY93 547 aaKnown RBP3.01□□□□□ -1.93
LINC00393-201ENST00000443621 RRN3Q9NYV6 651 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 PCYOX1Q9UHG3 505 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 IP6K2Q9UHH9 426 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 CPA4Q9UI42 421 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 DSEQ9UL01 958 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 MTUS1Q9ULD2 1270 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 L1RE1Q9UN81 338 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 PCDHA3Q9Y5H8 950 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 TRPV2Q9Y5S1 764 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 ALG6Q9Y672 507 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 CAPN6Q9Y6Q1 641 aa3.01□□□□□ -1.93
LINC00393-201ENST00000443621 V9GYY5 206 aaPredicted RBP3.01□□□□□ -1.93
LINC00393-201ENST00000443621 GRIN2DO15399 1336 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 PTPRJQ12913 1337 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 TCRBV5S1A1TA0A578 114 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 MACROD2A1Z1Q3 448 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 GOLGA8IPA6NC78 632 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 TMEM191CA6NGB0 347 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 GOLGA8JA6NMD2 632 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 TISP43B9A030 160 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 MAP2K7O14733 419 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 GABRDO14764 452 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 FSCN2O14926 492 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 TLR3O15455 904 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 CYP26A1O43174 497 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 HOXA2O43364 376 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 BUB1BO60566 1050 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 FKTNO75072 461 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 RPS6KA5O75582 802 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 PROSCO94903 275 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 ENDOD1O94919 500 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 FBXO21O94952 628 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 MOCS3O95396 460 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 SGPL1O95470 568 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 C1RP00736 705 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 ATP1A1P05023 1023 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 CYP11A1P05108 521 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 KRT7P08729 469 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 MARK3P27448 753 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 HTR7P34969 479 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 RDXP35241 583 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 GPD2P43304 727 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 ASPAP45381 313 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 NOP2P46087 812 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 AARSP49588 968 aaKnown RBP eCLIP3□□□□□ -1.938e-6■■■■■ 52.4
LINC00393-201ENST00000443621 TAF6P49848 677 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 BCAT1P54687 386 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 NAP1L1P55209 391 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 SOX10P56693 466 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 SLC8A3P57103 927 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 FAM189BP81408 668 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 MRPS6P82932 125 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 PLCB3Q01970 1234 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 CACNB2Q08289 660 aaPredicted RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 GOLGA8FQ08AF8 430 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 MGAT3Q09327 533 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 GOLGA8DPQ0D2H9 430 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 MAMLD1Q13495 774 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 BFSP2Q13515 415 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 MAPRE1Q15691 268 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 PKN2Q16513 984 aaKnown RBP3□□□□□ -1.93
LINC00393-201ENST00000443621 CCNG2Q16589 344 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 TAZQ16635 292 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 ARHGAP44Q17R89 818 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 ERCC6LQ2NKX8 1250 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 WDR72Q3MJ13 1102 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 PKDCCQ504Y2 493 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 BOLA3Q53S33 107 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 SGO2Q562F6 1265 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 EFHC1Q5JVL4 640 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 ALS2CLQ60I27 953 aa3□□□□□ -1.93
LINC00393-201ENST00000443621 TMEM270Q6UE05 265 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms