RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 OBP2AQ9NY56 170 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 CLCA2Q9UQC9 943 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 PIN4Q9Y237 131 aaKnown RBP8.11□□□□□ -1.11
SSXP3-201ENST00000442971 SF3B1O75533 1304 aaKnown RBP eCLIP8.11□□□□□ -1.11
SSXP3-201ENST00000442971 JMJD1CQ15652 2540 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 TDRD15B5MCY1 1934 aaKnown RBP8.11□□□□□ -1.11
SSXP3-201ENST00000442971 CSPG4Q6UVK1 2322 aa8.11□□□□□ -1.11
SSXP3-201ENST00000442971 A0A1B0GTW7 788 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 GCOM1H8Y6P7 765 aaPredicted RBP8.1□□□□□ -1.11
SSXP3-201ENST00000442971 ENC1O14682 589 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 SYNCRIPO60506 623 aaKnown RBP8.1□□□□□ -1.11
SSXP3-201ENST00000442971 SURF6O75683 361 aaKnown RBP8.1□□□□□ -1.11
SSXP3-201ENST00000442971 MPOP05164 745 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 POLR2MP0CAP2 368 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 MAOBP27338 520 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 BNC1Q01954 994 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 ZSCAN23Q3MJ62 389 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 SYCP2LQ5T4T6 812 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 FAM171A1Q5VUB5 890 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 IQCEQ6IPM2 695 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 MRPL10Q7Z7H8 261 aaKnown RBP8.1□□□□□ -1.11
SSXP3-201ENST00000442971 SLC34A3Q8N130 599 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 SMARCC2Q8TAQ2 1214 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 SHKBP1Q8TBC3 707 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 HMGB4Q8WW32 186 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 ZDHHC16Q969W1 377 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 SCLT1Q96NL6 688 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 MAP7D2Q96T17 732 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 MMS19Q96T76 1030 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 HPS4Q9NQG7 708 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 PKD2L1Q9P0L9 805 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 TPCN1Q9ULQ1 816 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 UBE4BO95155 1302 aa8.1□□□□□ -1.11
SSXP3-201ENST00000442971 ZFC3H1O60293 1989 aaKnown RBP8.09□□□□□ -1.11
SSXP3-201ENST00000442971 NUP210Q8TEM1 1887 aaPredicted RBP8.09□□□□□ -1.11
SSXP3-201ENST00000442971 PRRG1O14668 218 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 EFSO43281 561 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 WIPF1O43516 503 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 RANBP6O60518 1105 aaKnown RBP8.09□□□□□ -1.11
SSXP3-201ENST00000442971 APPP05067 770 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 ELF1P32519 619 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 SREBF1P36956 1147 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 UQCRFS1P47985 274 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 MCM2P49736 904 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 GPC3P51654 580 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 DNAJC3Q13217 504 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 TESK1Q15569 626 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 ZXDCQ2QGD7 858 aaPredicted RBP8.09□□□□□ -1.11
SSXP3-201ENST00000442971 ELMOD1Q8N336 334 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 DCBLD1Q8N8Z6 715 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 LEMD2Q8NC56 503 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 RABGGTAQ92696 567 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 GPRASP2Q96D09 838 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 SGF29Q96ES7 293 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 CCDC97Q96F63 343 aaPredicted RBP8.09□□□□□ -1.11
SSXP3-201ENST00000442971 ZNF419Q96HQ0 510 aaPredicted RBP8.09□□□□□ -1.11
SSXP3-201ENST00000442971 CDHR1Q96JP9 859 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 ZNF512Q96ME7 567 aaPredicted RBP8.09□□□□□ -1.11
SSXP3-201ENST00000442971 CCNL2Q96S94 520 aaPredicted RBP8.09□□□□□ -1.11
SSXP3-201ENST00000442971 KCNK17Q96T54 332 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 FAM83CQ9BQN1 747 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 LRRCC1Q9C099 1032 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 EBF3Q9H4W6 596 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 JPH1Q9HDC5 661 aaPredicted RBP8.09□□□□□ -1.11
SSXP3-201ENST00000442971 ASAH2Q9NR71 780 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 THSD1Q9NS62 852 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 PAG1Q9NWQ8 432 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 TBX20Q9UMR3 447 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.09□□□□□ -1.11
SSXP3-201ENST00000442971 COL6A5A8TX70 2615 aa8.09□□□□□ -1.11
SSXP3-201ENST00000442971 PALM3A6NDB9 673 aaPredicted RBP8.08□□□□□ -1.12
SSXP3-201ENST00000442971 DHX16O60231 1041 aaKnown RBP8.08□□□□□ -1.12
SSXP3-201ENST00000442971 USP11P51784 963 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 SEC13P55735 322 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 GABREP78334 506 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 PPARAQ07869 468 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 TBR1Q16650 682 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 WDR45BQ5MNZ6 344 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 DMRTA1Q5VZB9 504 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 PCNX4Q63HM2 1172 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 KDM7AQ6ZMT4 941 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 AACSQ86V21 672 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 NLRP7Q8WX94 980 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 SSH1Q8WYL5 1049 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 CD101Q93033 1021 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 PRIMPOLQ96LW4 560 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 POLR3CQ9BUI4 534 aaPredicted RBP8.08□□□□□ -1.12
SSXP3-201ENST00000442971 VAT1LQ9HCJ6 419 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 ASCL3Q9NQ33 180 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 WDR70Q9NW82 654 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 MIOSQ9NXC5 875 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 SLC9A2Q9UBY0 812 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 CDY1Q9Y6F8 540 aa8.08□□□□□ -1.12
SSXP3-201ENST00000442971 IGHV1OR15-9A0A0B4J2B8 117 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 A0A1W2PRU2 124 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 ANTXRLA6NF34 631 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 ARL5CA6NH57 179 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 MTSS1O43312 755 aa8.07□□□□□ -1.12
SSXP3-201ENST00000442971 HNRNPRO43390 633 aaKnown RBP8.07□□□□□ -1.12
SSXP3-201ENST00000442971 SFPQP23246 707 aaKnown RBP eCLIP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms