RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 HCFC2Q9Y5Z7 792 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 SLC4A7Q9Y6M7 1214 aa6.85□□□□□ -1.31
CHD6-204ENST00000440647 TNKSO95271 1327 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 WDR19Q8NEZ3 1342 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 DHX16O60231 1041 aaKnown RBP6.84□□□□□ -1.31
CHD6-204ENST00000440647 BUB1BO60566 1050 aaPredicted RBP6.84□□□□□ -1.31
CHD6-204ENST00000440647 CPP00450 1065 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 SCG5P05408 212 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 SNRPB2P08579 225 aaKnown RBP6.84□□□□□ -1.31
CHD6-204ENST00000440647 ACTN1P12814 892 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 BMP7P18075 431 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 HOXA5P20719 270 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 PAX3P23760 479 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 HSD3B2P26439 372 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 NOVP48745 357 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 NCKAP1LP55160 1127 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 ZNF200P98182 395 aaPredicted RBP6.84□□□□□ -1.31
CHD6-204ENST00000440647 ZNF543Q08ER8 600 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 FOXD4Q12950 439 aaPredicted RBP6.84□□□□□ -1.31
CHD6-204ENST00000440647 HDAC1Q13547 482 aaPredicted RBP6.84□□□□□ -1.31
CHD6-204ENST00000440647 DDR2Q16832 855 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 USH1GQ495M9 461 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 AKNAD1Q5T1N1 836 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 GPATCH4Q5T3I0 446 aaKnown RBP6.84□□□□□ -1.31
CHD6-204ENST00000440647 E4F1Q66K89 784 aaPredicted RBP6.84□□□□□ -1.31
CHD6-204ENST00000440647 MBLAC2Q68D91 279 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 IQCA1Q86XH1 822 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 TMEFF1Q8IYR6 380 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 USP38Q8NB14 1042 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 DNERQ8NFT8 737 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 SCFD2Q8WU76 684 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 RELTQ969Z4 430 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 SCLYQ96I15 445 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 TTC14Q96N46 770 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 ALDH8A1Q9H2A2 487 aaPredicted RBP6.84□□□□□ -1.31
CHD6-204ENST00000440647 KAT14Q9H8E8 782 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 JADE2Q9NQC1 790 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 TRMT13Q9NUP7 481 aaKnown RBP6.84□□□□□ -1.31
CHD6-204ENST00000440647 THEGQ9P2T0 379 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 FBLN5Q9UBX5 448 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 SCN5AQ14524 2016 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 DNAH12Q6ZR08 3092 aa6.84□□□□□ -1.31
CHD6-204ENST00000440647 GRIN2DO15399 1336 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 AGRPO00253 132 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 ZNF213O14771 459 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 KPNA6O60684 536 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 FUCA1P04066 466 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 CAPNS1P04632 268 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 TXNP10599 105 aaKnown RBP6.83□□□□□ -1.32
CHD6-204ENST00000440647 CYP2C9P11712 490 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 ATP2A2P16615 1042 aaKnown RBP6.83□□□□□ -1.32
CHD6-204ENST00000440647 PFKLP17858 780 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 GTF2F1P35269 517 aaKnown RBP eCLIP6.83□□□□□ -1.32
CHD6-204ENST00000440647 ECI1P42126 302 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 NT5C2P49902 561 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 RABGGTBP53611 331 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 RPS6P62753 249 aaKnown RBP6.83□□□□□ -1.32
CHD6-204ENST00000440647 PURAQ00577 322 aaKnown RBP6.83□□□□□ -1.32
CHD6-204ENST00000440647 TARBP2Q15633 366 aaKnown RBP6.83□□□□□ -1.32
CHD6-204ENST00000440647 CDC37Q16543 378 aaPredicted RBP6.83□□□□□ -1.32
CHD6-204ENST00000440647 INF2Q27J81 1249 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 SLC10A6Q3KNW5 377 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 CCDC178Q5BJE1 867 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 TMEM63BQ5T3F8 832 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 DEFB128Q7Z7B8 93 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 ZNF589Q86UQ0 364 aaPredicted RBP6.83□□□□□ -1.32
CHD6-204ENST00000440647 FAM129CQ86XR2 697 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 KREMEN2Q8NCW0 462 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 ATXN2LQ8WWM7 1075 aaKnown RBP6.83□□□□□ -1.32
CHD6-204ENST00000440647 DACT3Q96B18 629 aaPredicted RBP6.83□□□□□ -1.32
CHD6-204ENST00000440647 PEX11GQ96HA9 241 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 FTOQ9C0B1 505 aaKnown RBP eCLIP6.83□□□□□ -1.321e-11■■■□□ 16.2
CHD6-204ENST00000440647 WNT8AQ9H1J5 351 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 PIF1Q9H611 641 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 DIAPH3Q9NSV4 1193 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 NUDT5Q9UKK9 219 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 COMMD10Q9Y6G5 202 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 KIAA1217Q5T5P2 1943 aa6.83□□□□□ -1.32
CHD6-204ENST00000440647 SCN10AQ9Y5Y9 1956 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 ABCB11O95342 1321 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 NEDD4P46934 1319 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 HIP1O00291 1037 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 ARNTLO00327 626 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 GOLGA8HP0CJ92 632 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 SNHG28P0DPA3 235 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 SDSP20132 328 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 IGFBP6P24592 240 aaPredicted RBP6.82□□□□□ -1.32
CHD6-204ENST00000440647 RFC2P35250 354 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 KCNJ6P48051 423 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 MRPS5P82675 430 aaKnown RBP6.82□□□□□ -1.32
CHD6-204ENST00000440647 RBL2Q08999 1139 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 BFSP2Q13515 415 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 RAB33AQ14088 237 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 SF1Q15637 639 aaKnown RBP6.82□□□□□ -1.32
CHD6-204ENST00000440647 PLEKHG6Q3KR16 790 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 NFRKBQ6P4R8 1299 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 CNKSR3Q6P9H4 555 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 CWC27Q6UX04 472 aaKnown RBP6.82□□□□□ -1.32
CHD6-204ENST00000440647 DGKHQ86XP1 1220 aa6.82□□□□□ -1.32
CHD6-204ENST00000440647 TBC1D10CQ8IV04 446 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms