RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 DERAQ9Y315 318 aa15.9■□□□□ 0.14
IFT140-204ENST00000439987 HES2Q9Y543 173 aa15.9■□□□□ 0.14
IFT140-204ENST00000439987 TRIP11Q15643 1979 aa15.9■□□□□ 0.14
IFT140-204ENST00000439987 CEP104O60308 925 aa15.9■□□□□ 0.14
IFT140-204ENST00000439987 CCND3P30281 292 aaPredicted RBP15.9■□□□□ 0.14
IFT140-204ENST00000439987 SSTR3P32745 418 aaPredicted RBP15.9■□□□□ 0.14
IFT140-204ENST00000439987 RBP5P82980 135 aa15.9■□□□□ 0.14
IFT140-204ENST00000439987 MESDQ14696 234 aa15.9■□□□□ 0.14
IFT140-204ENST00000439987 PPP1R2P3Q6NXS1 205 aa15.9■□□□□ 0.14
IFT140-204ENST00000439987 ACTRT1Q8TDG2 376 aa15.9■□□□□ 0.14
IFT140-204ENST00000439987 HPDLQ96IR7 371 aa15.9■□□□□ 0.14
IFT140-204ENST00000439987 CFHR5Q9BXR6 569 aa15.9■□□□□ 0.14
IFT140-204ENST00000439987 CELF4Q9BZC1 486 aaKnown RBP15.9■□□□□ 0.14
IFT140-204ENST00000439987 NXF3Q9H4D5 531 aaKnown RBP15.9■□□□□ 0.14
IFT140-204ENST00000439987 RBM12Q9NTZ6 932 aaKnown RBP15.9■□□□□ 0.14
IFT140-204ENST00000439987 RALGAPA2Q2PPJ7 1873 aa15.9■□□□□ 0.14
IFT140-204ENST00000439987 HTTP42858 3142 aa15.89■□□□□ 0.14
IFT140-204ENST00000439987 TARSL2A2RTX5 802 aaKnown RBP15.89■□□□□ 0.13
IFT140-204ENST00000439987 DDX3YO15523 660 aaKnown RBP15.89■□□□□ 0.13
IFT140-204ENST00000439987 BRD2P25440 801 aaKnown RBP15.89■□□□□ 0.13
IFT140-204ENST00000439987 RAP1GAPP47736 663 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 RNASE9P60153 205 aaKnown RBP15.89■□□□□ 0.13
IFT140-204ENST00000439987 PHF13Q86YI8 300 aaPredicted RBP15.89■□□□□ 0.13
IFT140-204ENST00000439987 USP38Q8NB14 1042 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 VCPIP1Q96JH7 1222 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 RPS6KC1Q96S38 1066 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 ZSWIM1Q9BR11 485 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 CXCL16Q9H2A7 254 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 MYO1CO00159 1063 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 SASH3O75995 380 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 SEC31AO94979 1220 aaKnown RBP15.89■□□□□ 0.13
IFT140-204ENST00000439987 STAU1O95793 577 aaKnown RBP15.89■□□□□ 0.13
IFT140-204ENST00000439987 P4HA1P13674 534 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 RRM1P23921 792 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 CDH8P55286 799 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 VSNL1P62760 191 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 GDF6Q6KF10 455 aaPredicted RBP15.89■□□□□ 0.13
IFT140-204ENST00000439987 CCDC70Q6NSX1 233 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 WDR93Q6P2C0 686 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 ZMAT2Q96NC0 199 aaKnown RBP15.89■□□□□ 0.13
IFT140-204ENST00000439987 SDCBP2Q9H190 292 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 SMYD3Q9H7B4 428 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 SRRDQ9UH36 339 aa15.89■□□□□ 0.13
IFT140-204ENST00000439987 TMEM110-MUSTN1A8MSY1 372 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 MIF4GDA9UHW6 222 aaKnown RBP15.88■□□□□ 0.13
IFT140-204ENST00000439987 TRPA1O75762 1119 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 RECQL4O94761 1208 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 IVLP07476 585 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 ALKAL1Q6UXT8 129 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 RASGEF1CQ8N431 466 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 TFAP2BQ92481 460 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 C11orf70Q9BRQ4 267 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 CYP3A43Q9HB55 503 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 ADAM22Q9P0K1 906 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 M0QZ92 97 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 PGRMC1O00264 195 aaKnown RBP15.88■□□□□ 0.13
IFT140-204ENST00000439987 LSM8O95777 96 aaKnown RBP15.88■□□□□ 0.13
IFT140-204ENST00000439987 ASGR1P07306 291 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 COMTP21964 271 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 MRPS6P82932 125 aaKnown RBP15.88■□□□□ 0.13
IFT140-204ENST00000439987 ZBTB6Q15916 424 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 C2CD6Q53TS8 623 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 GOLGA6L1Q8N7Z2 621 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 BTBD6Q96KE9 485 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.88■□□□□ 0.132e-6■■■■□ 21.2
IFT140-204ENST00000439987 CARD9Q9H257 536 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 CNTN3Q9P232 1028 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 PCDHGC3Q9UN70 934 aa15.88■□□□□ 0.13
IFT140-204ENST00000439987 C1QBPQ07021 282 aaKnown RBP15.87■□□□□ 0.13
IFT140-204ENST00000439987 KCNA10Q16322 511 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 FAM47CQ5HY64 1035 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 UBXN11Q5T124 520 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 LIN9Q5TKA1 542 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 DCAF12L1Q5VU92 463 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 RSPH3Q86UC2 560 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 PLCD3Q8N3E9 789 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 KLHDC9Q8NEP7 349 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 HNRNPLLQ8WVV9 542 aaKnown RBP15.87■□□□□ 0.13
IFT140-204ENST00000439987 LRRC1Q9BTT6 524 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 RSPH14Q9UHP6 348 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 TMEM59LQ9UK28 342 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 ADAM21Q9UKJ8 722 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 PAEPP09466 180 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 AKAP5P24588 427 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 HOXD10P28358 340 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 RAD23BP54727 409 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 PTP4A2Q12974 167 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 MMS22LQ6ZRQ5 1243 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 SERINC5Q86VE9 423 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 FAM228AQ86W67 206 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 CD99L2Q8TCZ2 262 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 WHAMMQ8TF30 809 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 ALG3Q92685 438 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 APOL6Q9BWW8 343 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 FUT8Q9BYC5 575 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 ANAPC7Q9UJX3 599 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 NOC2LQ9Y3T9 749 aaKnown RBP15.87■□□□□ 0.13
IFT140-204ENST00000439987 CDY2AQ9Y6F7 541 aa15.87■□□□□ 0.13
IFT140-204ENST00000439987 CILPO75339 1184 aa15.86■□□□□ 0.13
IFT140-204ENST00000439987 HMGCRP04035 888 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms