RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 ALKAL1Q6UXT8 129 aa15.36■□□□□ 0.05
LINC01088-201ENST00000437737 TMC8Q8IU68 726 aa15.36■□□□□ 0.05
LINC01088-201ENST00000437737 NECAB1Q8N987 351 aa15.36■□□□□ 0.05
LINC01088-201ENST00000437737 TNFRSF25Q93038 417 aa15.36■□□□□ 0.05
LINC01088-201ENST00000437737 C18orf25Q96B23 403 aaPredicted RBP15.36■□□□□ 0.05
LINC01088-201ENST00000437737 PGLYRP2Q96PD5 576 aa15.36■□□□□ 0.05
LINC01088-201ENST00000437737 MTMR9Q96QG7 549 aa15.36■□□□□ 0.05
LINC01088-201ENST00000437737 ORC3Q9UBD5 711 aaPredicted RBP15.36■□□□□ 0.05
LINC01088-201ENST00000437737 CEP295Q9C0D2 2601 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 CCDC163A0A0D9SF12 145 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 WNT7AO00755 349 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 LARGE1O95461 756 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 KCNE1P15382 129 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 PDCP20941 246 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 TCEAL6Q6IPX3 200 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 PKN3Q6P5Z2 889 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 SPRYD3Q8NCJ5 442 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 ERMNQ8TAM6 284 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 TCEAL3Q969E4 200 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 ACAP3Q96P50 834 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 TCHPQ9BT92 498 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 POLR3CQ9BUI4 534 aaPredicted RBP15.35■□□□□ 0.05
LINC01088-201ENST00000437737 EDEM2Q9BV94 578 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 LRRC3Q9BY71 257 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 ATXN3LQ9H3M9 355 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 CIZ1Q9ULV3 898 aaPredicted RBP15.35■□□□□ 0.05
LINC01088-201ENST00000437737 PCDHB8Q9UN66 801 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 PHLPP2Q6ZVD8 1323 aa15.35■□□□□ 0.05
LINC01088-201ENST00000437737 FRYQ5TBA9 3013 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 CCDC169A6NNP5 214 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 ATG13O75143 517 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 AKAP3O75969 853 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 OR4Q2P0C623 313 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 HARSP12081 509 aaKnown RBP15.34■□□□□ 0.05
LINC01088-201ENST00000437737 ALDH1A3P47895 512 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 PLCB2Q00722 1185 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 YWHAHQ04917 246 aaPredicted RBP15.34■□□□□ 0.05
LINC01088-201ENST00000437737 TNK2Q07912 1038 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 ZNF252P-AS1Q0IIN9 211 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 DUSP4Q13115 394 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 PTPAQ15257 358 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 ITPRIPL2Q3MIP1 535 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 ARHGAP15Q53QZ3 475 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 GPR158Q5T848 1215 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 BPIFB1Q8TDL5 484 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 KIFAP3Q92845 792 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 LRRC3BQ96PB8 259 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 TMEM209Q96SK2 561 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 ACO2Q99798 780 aaKnown RBP15.34■□□□□ 0.05
LINC01088-201ENST00000437737 MRPL4Q9BYD3 311 aaKnown RBP15.34■□□□□ 0.05
LINC01088-201ENST00000437737 DNAJC25Q9H1X3 360 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 TMEM60Q9H2L4 133 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 OBP2AQ9NY56 170 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 CNTN3Q9P232 1028 aa15.34■□□□□ 0.05
LINC01088-201ENST00000437737 BTBD18B2RXH4 712 aa15.33■□□□□ 0.04
LINC01088-201ENST00000437737 GIPC1O14908 333 aa15.33■□□□□ 0.04
LINC01088-201ENST00000437737 RPA1P27694 616 aa15.33■□□□□ 0.04
LINC01088-201ENST00000437737 GABRR2P28476 465 aa15.33■□□□□ 0.04
LINC01088-201ENST00000437737 MCM7P33993 719 aa15.33■□□□□ 0.04
LINC01088-201ENST00000437737 PLK5Q496M5 336 aa15.33■□□□□ 0.04
LINC01088-201ENST00000437737 KDF1Q8NAX2 398 aaPredicted RBP15.33■□□□□ 0.04
LINC01088-201ENST00000437737 FAM184AQ8NB25 1140 aa15.33■□□□□ 0.04
LINC01088-201ENST00000437737 BEST2Q8NFU1 509 aa15.33■□□□□ 0.04
LINC01088-201ENST00000437737 ZC3H10Q96K80 434 aaKnown RBP15.33■□□□□ 0.04
LINC01088-201ENST00000437737 MKNK1Q9BUB5 465 aa15.33■□□□□ 0.04
LINC01088-201ENST00000437737 FOXD4L1Q9NU39 408 aa15.33■□□□□ 0.04
LINC01088-201ENST00000437737 THG1LQ9NWX6 298 aaKnown RBP15.33■□□□□ 0.04
LINC01088-201ENST00000437737 CHMP5Q9NZZ3 219 aa15.33■□□□□ 0.04
LINC01088-201ENST00000437737 TIMM13Q9Y5L4 95 aaPredicted RBP15.33■□□□□ 0.04
LINC01088-201ENST00000437737 C4orf47A7E2U8 309 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 VNN2O95498 520 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 PRAMEF12O95522 483 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 FGF19O95750 216 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 MCF2P10911 925 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 SPINK2P20155 84 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 FOSBP53539 338 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 NUCB2P80303 420 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 CREB5Q02930 508 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 GRSF1Q12849 480 aaKnown RBP eCLIP15.32■□□□□ 0.04
LINC01088-201ENST00000437737 ELF2Q15723 593 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 DAB2IPQ5VWQ8 1189 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 GAREM2Q75VX8 874 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 USP37Q86T82 979 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 DIS3L2Q8IYB7 885 aaKnown RBP15.32■□□□□ 0.04
LINC01088-201ENST00000437737 TARS2Q9BW92 718 aaKnown RBP15.32■□□□□ 0.04
LINC01088-201ENST00000437737 OXCT2Q9BYC2 517 aaPredicted RBP15.32■□□□□ 0.04
LINC01088-201ENST00000437737 ADAM33Q9BZ11 813 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 CRISPLD1Q9H336 500 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 PTPRHQ9HD43 1115 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 TUBGCP4Q9UGJ1 667 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 SLC27A5Q9Y2P5 690 aa15.32■□□□□ 0.04
LINC01088-201ENST00000437737 ZNF638Q14966 1978 aaKnown RBP15.32■□□□□ 0.04
LINC01088-201ENST00000437737 NUP205Q92621 2012 aa15.31■□□□□ 0.04
LINC01088-201ENST00000437737 TMEM8BA6NDV4 472 aa15.31■□□□□ 0.04
LINC01088-201ENST00000437737 RHOBTB1O94844 696 aa15.31■□□□□ 0.04
LINC01088-201ENST00000437737 CTDNEP1O95476 244 aa15.31■□□□□ 0.04
LINC01088-201ENST00000437737 GJB2P29033 226 aa15.31■□□□□ 0.04
LINC01088-201ENST00000437737 PEX3P56589 373 aa15.31■□□□□ 0.04
LINC01088-201ENST00000437737 CYP4F8P98187 520 aa15.31■□□□□ 0.04
LINC01088-201ENST00000437737 CACNB1Q02641 598 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms